DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smyd5 and ASHR2

DIOPT Version :9

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_849991.1 Gene:ASHR2 / 816483 AraportID:AT2G19640 Length:398 Species:Arabidopsis thaliana


Alignment Length:454 Identity:93/454 - (20%)
Similarity:158/454 - (34%) Gaps:188/454 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IRELPGKGRAMIATKNFAKDEVIFEEE--------PFVSRQFSWNVAYGYAACDHCMRPLETVLE 62
            :.|:.|:||:::|.::....:||..|.        ||:|...|       ..||||.|.|.:   
plant    15 VAEIGGRGRSLVAAQSLRAGQVILRESPLLLYSAFPFLSSSVS-------PYCDHCFRLLAS--- 69

  Fly    63 NVRRLASDPKVEVPLLQHDPTAQWVAQFTQCPRCK-VRYCSEDCLMEAQKRYHRVACMGAFHSDD 126
                                     :...:|..|. |.:||.:|.              |.|:  
plant    70 -------------------------SAHQKCQSCSLVSFCSPNCF--------------ASHT-- 93

  Fly   127 THPINVLNETWKKMHYPPETGSIMLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKML 191
                     .|             |...|..|:|.|:  ..|.:|..                  
plant    94 ---------PW-------------LCESLRRLHQSSS--SAFSDQPS------------------ 116

  Fly   192 GENFEQQMEQLYLAFCNAFTGEEFSIFK----TPDAFKTLMAILGTNSQ--------------GI 238
                ::|::..:|          .|.:.    :|..|:.|:::.|:.|.              |.
plant   117 ----DRQVQARFL----------LSAYNLAAASPSDFQILLSLQGSGSSNGDPSCSAGDSAAAGF 167

  Fly   239 ATSVLSQWVAKVSDLPLTDS--------EKEQLDTVIDGLYAKVGEFAGEFLNNE-----GSGLY 290
            ..|:||   :....||::.|        .|::::..  ||.....      ::||     ..|:|
plant   168 LHSLLS---SVCPSLPVSISPDLTAALLSKDKVNAF--GLMEPCS------VSNEKRSVRAYGIY 221

  Fly   291 LLQSKINHSCVPNACSTFPY------SNDIVVLKALAPIQQGEEICISYLDECMLERSRHSRHKV 349
            ...|..||.|:|||| .|.|      .|..::::.:..:.:|.|:|:||..   :..:..||.|.
plant   222 PKTSFFNHDCLPNAC-RFDYVDSASDGNTDIIIRMIHDVPEGREVCLSYFP---VNMNYSSRQKR 282

  Fly   350 LRENYVFICQCPKCRAQAS------DPDETSEDDDDDDEMDDYDD--------------DDDMN 393
            |.|:|.|.|.|.:|:.:.|      |.:|..|:.:|.||.::.:|              ||:.|
plant   283 LLEDYGFKCDCDRCKVEFSWSEGEEDENEIMEEMEDQDEQEEMEDSVGENEEEVCGNGVDDESN 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 zf-MYND 87..118 CDD:280009 6/31 (19%)
SET <296..333 CDD:279228 13/42 (31%)
ASHR2NP_849991.1 SET <192..275 CDD:214614 23/94 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 100 1.000 Inparanoid score I2176
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

Return to query results.
Submit another query.