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Protein Alignment Smyd5 and Smyd3

DIOPT Version :9

Sequence 1:	NP_650955.1	Gene:	Smyd5 / 42517	FlyBaseID:	FBgn0038869	Length:	393	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	374	Identity:	85/374 - (22%)
Similarity:	144/374 - (38%)	Gaps:	115/374 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 KGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGY--AACDHCMRPLETVLENVRRLASDPKVE 74
            :|..:.|.......|::|..:|     .::.|..|.  ..||.|:...|.::
Mouse    14 RGNGLRAVAPLRPGELLFRSDP-----LAYTVCKGSRGVVCDRCLLGKEKLM------------- 60

  Fly    75 VPLLQHDPTAQWVAQFTQCPRCKV-RYCSEDCLMEAQKRYHR-VACMGAFHSDDTHPINVLNETW 137
                             :|.:|:: :|||..|..:|...:.| .:|:.:.
Mouse    61 -----------------RCSQCRIAKYCSAKCQKKAWPDHRRECSCLKSC--------------- 93

  Fly   138 KKMHYPPETGSIM--LIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKMLGENFEQQME 200
             |..|||::..::  :||:||      .:|....|:|.||..|..|..:      |.|:.::.:.
Mouse    94 -KPRYPPDSVRLLGRVIVKLM------DEKPSESEKLYSFYDLESNISK------LTEDKKEGLR 145

  Fly   201 QLYLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKV--SDLPLTDSEKEQL 263
            ||.:.|.:....|.....:.|.:|....|.                 |||  :...:.::|.:::
Mouse   146 QLAMTFQHFMREEIQDASQLPPSFDLFEAF-----------------AKVICNSFTICNAEMQEV 193

  Fly   264 DTVIDGLYAKVGEFAGEFLNNEGSGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAPIQQGEE 328
                                  |.|||...|.:||||.|| || ..::...::|:|:..|:.|||
Mouse   194 ----------------------GVGLYPSMSLLNHSCDPN-CS-IVFNGPHLLLRAVREIEAGEE 234

  Fly   329 ICISYLDECMLERSRHSRHKVLRENYVFICQCPKCRAQASDPDETSEDD 377
            :.|.|||..|   :...|.|.||:.|.|.|.|.:|:.|..|.|..:.|:
Mouse   235 LTICYLDMLM---TSEERRKQLRDQYCFECDCIRCQTQDKDADMLTGDE 280

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.