DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd5 and SMYD2

DIOPT Version :9

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:395 Identity:84/395 - (21%)
Similarity:136/395 - (34%) Gaps:171/395 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PGKGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAA--------CDHCMRPLETVLENVRR 66
            |||||.:.|.:.|...:::|.           ..||.|..        |::|....|.:      
Human    15 PGKGRGLRALQPFQVGDLLFS-----------CPAYAYVLTVNERGNHCEYCFTRKEGL------ 62

  Fly    67 LASDPKVEVPLLQHDPTAQWVAQFTQCPRCK-VRYCSEDCLMEAQKR---YHRVACMGAFHSDDT 127
                                    ::|.||| ..||:.:|    ||.   .|::.|         
Human    63 ------------------------SKCGRCKQAFYCNVEC----QKEDWPMHKLEC--------- 90

  Fly   128 HPINVLNETWKKMHYPPETGSIMLIVRLMA---LYQQSTKKEEFLEQLQSFQSLI--VNREQK-- 185
            .|:.|..|.|.    |.||  :.|..|::|   ::.:.|..|:.| .::.|:|.:  ::.|:|  
Human    91 SPMVVFGENWN----PSET--VRLTARILAKQKIHPERTPSEKLL-AVKEFESHLDKLDNEKKDL 148

  Fly   186 ----------IYHKMLG--ENFEQQMEQLYLAF----CNAFTGEEFSIFKTPDAFKTLMAILGTN 234
                      .|.|.||  :|     :.|.:.|    ||.||.|:                    
Human   149 IQSDIAALHHFYSKHLGFPDN-----DSLVVLFAQVNCNGFTIED-------------------- 188

  Fly   235 SQGIATSVLSQWVAKVSDLPLTDSEKEQLDTVIDGLYAKVGEFAGEFLNNEGSGLYLLQSKINHS 299
                                                         |.|::.||.::...:.:|||
Human   189 ---------------------------------------------EELSHLGSAIFPDVALMNHS 208

  Fly   300 CVPNACSTFPYSNDIVVLKALAPIQQGEEICISYLDECMLERSRHSRHKVLRENYVFICQCPKCR 364
            |.||...|  |...:..::|:..|:.|||:..||:|.......|:.|   ||::|.|.|:|.:|.
Human   209 CCPNVIVT--YKGTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDR---LRDSYFFTCECQECT 268

  Fly   365 AQASD 369
            .:..|
Human   269 TKDKD 273

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 zf-MYND 87..118 CDD:280009 10/34 (29%)
SET <296..333 CDD:279228 13/36 (36%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 83/389 (21%)
S-adenosyl-L-methionine binding 17..19 1/1 (100%)
zf-MYND 52..90 CDD:396356 13/71 (18%)
Peptide substrate binding 183..185 0/1 (0%)