DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd5 and smyd5

DIOPT Version :10

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001004614.2 Gene:smyd5 / 447875 ZFINID:ZDB-GENE-040912-39 Length:415 Species:Danio rerio


Alignment Length:387 Identity:176/387 - (45%)
Similarity:245/387 - (63%) Gaps:11/387 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAACDHCMRPLETVLENVRRLASDPKVEVP 76
            ||:.:.|.|.|.|.:.||.|.|.||.||.||..|.|.||::|:|.|||..||.|||:..|.:.:|
Zfish    31 KGKGLFAKKPFKKGDTIFIERPLVSSQFLWNALYKYRACEYCLRALETAEENARRLSGLPALILP 95

  Fly    77 ---LLQHDPTAQWVAQFTQCPRCKVRYCSEDCLMEAQKRYHRVACMGAFHSDDTHPINVLNETWK 138
               |.:..|.     :...||:|:|.|||.:|...|..:||::.|:|..:.|..||:|.|.:.|:
Zfish    96 HPELCKVRPD-----RHQACPQCQVMYCSSECRQAAMDQYHKILCLGPSNDDPDHPVNKLQDAWR 155

  Fly   139 KMHYPPETGSIMLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKMLGENFEQQMEQLY 203
            .:|:||||.|:|::.:::|..:|:..||.:.....:|.|...|.|::|.||:|||.|:.|:..|.
Zfish   156 SVHFPPETSSVMILAKMVATIKQTQDKERWQRLFTNFCSRTANEEEEIVHKLLGEKFQGQLGLLR 220

  Fly   204 LAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKVSDLPLTDSEKEQLDTVID 268
            ..|..|...:..|.:.||:.|::|.:::|||.|||.||.|||||.....|.|...::||||..||
Zfish   221 NLFTTALYEDRLSQWFTPEGFRSLFSLVGTNGQGIGTSSLSQWVHACDALELPRQQREQLDAFID 285

  Fly   269 GLYAKVGEFAGEFLNNEGSGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAPIQQGEEICISY 333
            .||..:.:..|:|||.|||||:||||..||||||||.::||.:|.::.|.||..|..||||||||
Zfish   286 QLYKDIDKETGDFLNCEGSGLFLLQSSCNHSCVPNAEASFPENNFLLHLTALGDIGPGEEICISY 350

  Fly   334 LDECMLERSRHSRHKVLRENYVFICQCPKCRAQASDPDETSEDDDD---DDEMDDYDDDDDM 392
            ||.|..:||||||||:|||||:|||.|.||.:|..|.|.||||:::   :.|.:..|.:|:|
Zfish   351 LDCCQRDRSRHSRHKILRENYLFICSCQKCLSQMDDADMTSEDEEEVEGEGETEGEDMEDEM 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 SET_SMYD5 3..366 CDD:380919 165/356 (46%)
zf-MYND 87..118 CDD:460312 11/30 (37%)
smyd5NP_001004614.2 SET_SMYD5 21..383 CDD:380919 165/356 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..415 9/25 (36%)

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