DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd5 and SmydA-7

DIOPT Version :9

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster


Alignment Length:363 Identity:69/363 - (19%)
Similarity:115/363 - (31%) Gaps:118/363 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RQFSWNVAYG-------YAACDHCMRPLETVLENVRRLASDPKVEVPLLQHDPTAQWVAQFTQCP 94
            ::|..|:.:.       :......:.|.:|:||           |.|||        ||...:|.
  Fly     2 QEFGENIQHAHDEKLGRHLVASIAIEPGDTILE-----------ERPLL--------VAPHWECH 47

  Fly    95 RCKVRYCSEDCLMEAQKRYHRVACMGAFHSDD--------------THPINVLNETWKKMHYPPE 145
            :.|...|.::..:..::......||.....|:              ...|.|.|           
  Fly    48 QLKCAQCLQESYVICRRCQVFPLCMDCNQHDEFECEFFTSGAGKALCKDILVKN----------- 101

  Fly   146 TGSIMLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKMLGENFEQQMEQLYLAFCNAF 210
            .|...|:..|:.|....||.:     .|....:.:|...  |..  ||...|:.|:|.:      
  Fly   102 FGICGLLKLLLLLENPRTKGD-----CQMLIDVPINLSD--YRD--GEGMWQEHEELVV------ 151

  Fly   211 TGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKVSDLPLTDSEKEQLDTVIDGLYA--- 272
                          :.||      ..|:|..:.:|                  :...|.|:|   
  Fly   152 --------------RPLM------ESGLADVLPTQ------------------ELTSDALHAHCI 178

  Fly   273 KVGEFAGEFLNNEG---SGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAPIQQGEEICISYL 334
            ::...:.|....:|   .|:::..:.:.|.||||.........: :.|.|..|:|.|:.|..||.
  Fly   179 RIDSNSFEVTAKDGDTLKGIFVWGATLPHHCVPNTVVALDEQFN-MKLYAAVPLQPGDIIYNSYT 242

  Fly   335 DECMLERSRHSRHKVLRENYVFICQCPKCRAQASDPDE 372
            :..|   ....|...||.:....|.|.:|    .||.|
  Fly   243 NPLM---GTSQRQHQLRLSRRLECICSRC----LDPTE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 zf-MYND 87..118 CDD:280009 5/30 (17%)
SET <296..333 CDD:279228 11/36 (31%)
SmydA-7NP_001261039.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442314
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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