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Protein Alignment Smyd5 and Smyd4

DIOPT Version :9

Sequence 1:	NP_650955.1	Gene:	Smyd5 / 42517	FlyBaseID:	FBgn0038869	Length:	393	Species:	Drosophila melanogaster
Sequence 2:	NP_001096081.1	Gene:	Smyd4 / 319822	MGIID:	2442796	Length:	799	Species:	Mus musculus

Alignment Length:	425	Identity:	85/425 - (20%)
Similarity:	152/425 - (35%)	Gaps:	132/425 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 PGKGRAMIATKNFAKDEVIFEEEPFVS---------------RQFSWNVAYGYAACDHCMRPLET 59
            |.|||.::|||:....|::.:|:.|||               .::...|..|...|..|::
Mouse   241 PLKGRHLVATKDILPGELLVKEDAFVSVLIPGEMPRPHHCLENKWDTRVTSGDLYCHRCLK---- 301

  Fly    60 VLENVRRLASDPKVEVPLLQHDPTAQWVAQFTQCPRCK-VRYCSEDCLMEAQKRYHRVAC----- 118
                 ..||:.|                     |..|. .:|||::|:.:|...||...|
Mouse   302 -----HTLATVP---------------------CGSCSYAKYCSQECMQQAWDLYHSTECSLGGL 340

  Fly   119 ---MGAFHSDDTHPINVLNETWKKMHYPPETGSIMLIVRLMALYQQSTKKEEFL-EQLQSFQSLI 179
               :|.|                 .|       :.|.:.|:|.::...:....| :::.|..:.:
Mouse   341 LLTLGVF-----------------CH-------VALRMTLLARFEDVDRVVRMLCDEVGSTDTCL 381

  Fly   180 ---VNREQKIYHKMLGENFEQ-QMEQLYLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQ---- 236
               .|..:...:...||:.|: ::.:..:..||. .|:..|.:   :|..:|:.....:|.
Mouse   382 PESKNLVKAFDYTSQGESEEKSKIGEPPIPGCNV-NGKYGSNY---NAIFSLLPHTEKHSPEHRF 442

  Fly   237 --GIATSVLSQWVAKVSDLPLTDSEKEQLDTVIDGLYAKVGEFAGEFL----------------- 282
              .|:.|.|.:.: |...:.....:..:|..|..||.|.:..:....|
Mouse   443 ICAISVSALCRQL-KADSVQAQTLKSPKLKAVTPGLCADLTVWGAAMLRHMLQLQCNAQAITSIC 506

  Fly   283 ---NNE-----------GSGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAPIQQGEEI--CI 331
               :||           .:|::.:.|.:||||.||...:|  :..:..::|...|.:|:||  |.
Mouse   507 HTGSNESIITNSRQIRLATGIFPVVSLLNHSCRPNTSVSF--TGTVATVRAAQRIAKGQEILHCY 569

  Fly   332 SYLDECMLERSRHSRHKVLRENYVFICQCPKCRAQ 366
            ...:..|....|..|   |...|.|.|:|..|.|:
Mouse   570 GPHESRMGVAERQQR---LSSQYFFDCRCGACHAE 601

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.