DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd5 and SmydA-8

DIOPT Version :9

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster


Alignment Length:369 Identity:74/369 - (20%)
Similarity:123/369 - (33%) Gaps:119/369 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NFEIRELPGKGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAACDHCMRPLETVLENVRRL 67
            |:.|......||.:.||::.|..|:||:|...|:...:.........|.|     ||:       
  Fly    56 NWTISSSTVAGRGVFATRDIAAGELIFQERALVTGPTARKGQLSSCICCH-----ETL------- 108

  Fly    68 ASDPKVEVPLLQHDPTAQWVAQFTQCPRCKVRYCSEDCLMEAQKRYHRVACMGAFHSDDTHPINV 132
               |:... |.:|              ||.:..| |.|   :....|:..|.   |.....|.:|
  Fly   109 ---PQTGF-LCRH--------------RCTLPVC-ETC---SDSEEHQAECE---HFRRWQPKDV 148

  Fly   133 LNETWKKMHYPPETGSIMLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKMLGENFEQ 197
            ..|   :....|.:..|:..||:..|.:         ||.....::..|.|:.         :.:
  Fly   149 DAE---QEQVNPMSLRILTAVRVFHLGK---------EQRHLVDAMQANAERA---------YRR 192

  Fly   198 QMEQLYLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKVSDLPLTDSEKEQ 262
            ::.|....|.|..|.:.  :|.  |....::.:|.||:               .:.|......| 
  Fly   193 EIIQAAQCFRNFPTTDR--VFM--DQLFRIVGVLNTNA---------------FEAPCRSGGHE- 237

  Fly   263 LDTVIDGLYAKVGEFAGEFLNNEGSGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAPIQQGE 327
              |::.||:.                   |.:.:||.|.|||...|. :..:.|::|...|.:|.
  Fly   238 --TLLRGLFP-------------------LTAIMNHECTPNASHYFE-NGRLAVVRAARDIPKGG 280

  Fly   328 EICISYLD--------ECMLERSRHSRHKVLRENYVFICQCPKC 363
            ||..:|..        ...|:.::|           |.|.|.:|
  Fly   281 EITTTYTKILWGNLTRNIFLKMTKH-----------FACDCVRC 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 zf-MYND 87..118 CDD:280009 6/30 (20%)
SET <296..333 CDD:279228 13/36 (36%)
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 29/154 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452044
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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