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Protein Alignment Smyd5 and Zmynd15
DIOPT Version :9
Sequence 1: | NP_650955.1 |
Gene: | Smyd5 / 42517 |
FlyBaseID: | FBgn0038869 |
Length: | 393 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099270.1 |
Gene: | Zmynd15 / 287457 |
RGDID: | 1309845 |
Length: | 738 |
Species: | Rattus norvegicus |
Alignment Length: | 128 |
Identity: | 30/128 - (23%) |
Similarity: | 43/128 - (33%) |
Gaps: | 50/128 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 HCMRPLETVLENVRRLASDPKVEVPLLQHDPTAQW------------------------VAQFTQ 92
|..|.||::: |::.|.|.: .|...| ..:.|.
Rat 269 HLHRELESLV---------PRLGVKLAK-TPMRTWGPRPGFTFASLRARTCHVCHKHSFEVKLTP 323
Fly 93 CPRCK-VRYCSEDCLMEAQKR-----YHRVAC--MGAFHS--------DDTHPINVLNETWKK 139
||:|. |.||.|.||....:| .||..| :.||.. ..|:...|.:||:.|
Rat 324 CPQCSAVLYCGEACLQADWRRCPDDVSHRFWCPRLAAFMERAGELASLPFTYTAEVTSETFNK 386
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Smyd5 | NP_650955.1 |
zf-MYND |
87..118 |
CDD:280009 |
13/36 (36%) |
SET |
<296..333 |
CDD:279228 |
|
Zmynd15 | NP_001099270.1 |
zf-MYND |
309..355 |
CDD:280009 |
13/45 (29%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG2084 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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