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Protein Alignment Smyd5 and set5
DIOPT Version :9
Sequence 1: | NP_650955.1 |
Gene: | Smyd5 / 42517 |
FlyBaseID: | FBgn0038869 |
Length: | 393 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_588413.1 |
Gene: | set5 / 2538853 |
PomBaseID: | SPCC1739.05 |
Length: | 319 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 117 |
Identity: | 38/117 - (32%) |
Similarity: | 58/117 - (49%) |
Gaps: | 9/117 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 256 TDSEKEQLDTVIDGLYAKVGEFAGEFLNN------EGSGLYLLQSKINHSCVPNACSTFPYSNDI 314
|..|:|....:.:.....:|.|.|.|.:| ...|::||.|::||.|.||...|:....|.
pombe 57 TKEEQEAFHRLFNAHPDTMGPFLGPFYSNALTIDETKGGMFLLGSRMNHDCSPNVKHTWNPRLDQ 121
Fly 315 VVLKALAPIQQGEEICISYLDECMLERSRHSRHKVLRENYVFICQCPKCRAQ 366
|.:.|:..|:.||||..:|:| |.:|...|.|:|.|::.|.|.|..|..:
pombe 122 VTVHAVRDIEAGEEILTTYID---LHKSHTERQKILLEHFGFKCYCSVCSVE 170
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Smyd5 | NP_650955.1 |
zf-MYND |
87..118 |
CDD:280009 |
|
SET |
<296..333 |
CDD:279228 |
14/36 (39%) |
set5 | NP_588413.1 |
SET |
<1..319 |
CDD:225491 |
38/117 (32%) |
SET |
4..147 |
CDD:214614 |
29/92 (32%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG2084 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0005444 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto101510 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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