DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd5 and Smyd2

DIOPT Version :10

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_081072.1 Gene:Smyd2 / 226830 MGIID:1915889 Length:433 Species:Mus musculus


Alignment Length:377 Identity:79/377 - (20%)
Similarity:133/377 - (35%) Gaps:137/377 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GKGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAA----------CDHCMRPLETVLENVR 65
            ||||.:.|.:.|...:::|.             ...||.          |:.|....|.:     
Mouse    16 GKGRGLRALRPFHVGDLLFS-------------CPAYACVLTVGERGHHCECCFARKEGL----- 62

  Fly    66 RLASDPKVEVPLLQHDPTAQWVAQFTQCPRCK-VRYCSEDCLMEAQKR---YHRVACMGAFHSDD 126
                                     ::|.||| ..||..:|    ||.   .|::.|..      
Mouse    63 -------------------------SKCGRCKQAFYCDVEC----QKEDWPLHKLECSS------ 92

  Fly   127 THPINVLNETWKKMHYPPETGSIMLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKML 191
               :.||.|.|.    |.||  :.|..|::|       |::...:....:.|:..||        
Mouse    93 ---MVVLGENWN----PSET--VRLTARILA-------KQKIHPERTPSEKLLAVRE-------- 133

  Fly   192 GENFEQQMEQLYLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKVSDLPLT 256
               ||..:::|        ..|:..:.::..|                  .|.|:.:|..:.|  
Mouse   134 ---FESHLDKL--------DNEKKDLIQSDIA------------------ALHQFYSKYLEFP-- 167

  Fly   257 DSEKEQLDTVIDGLYAKVG----EFAGEFLNNEGSGLYLLQSKINHSCVPNACSTFPYSNDIVVL 317
                :....|:  |:|:|.    ....|.|::.||.::...:.:||||.||...|  |...:..:
Mouse   168 ----DHSSLVV--LFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVT--YKGTLAEV 224

  Fly   318 KALAPIQQGEEICISYLDECMLERSRHSRHKVLRENYVFICQCPKCRAQASD 369
            :|:..|..|:|:..||:|.......|:.|   ||::|.|.|:|.:|..:..|
Mouse   225 RAVQEIHPGDEVFTSYIDLLYPTEDRNDR---LRDSYFFTCECRECTTKDKD 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 SET_SMYD5 3..366 CDD:380919 78/372 (21%)
zf-MYND 87..118 CDD:460312 10/34 (29%)
Smyd2NP_081072.1 SET_SMYD2 7..269 CDD:380979 78/371 (21%)
zf-MYND 52..90 CDD:460312 13/71 (18%)
TPR_10 388..422 CDD:463861
Blue background indicates that the domain is not in the aligned region.

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