DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd5 and LOC1270660

DIOPT Version :10

Sequence 1:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_061511731.1 Gene:LOC1270660 / 1270660 VectorBaseID:AGAMI1_014244 Length:615 Species:Anopheles gambiae


Alignment Length:429 Identity:85/429 - (19%)
Similarity:142/429 - (33%) Gaps:151/429 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NNFEIRELPGKGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAACDHC--MRPLETVLENV 64
            |..|:|:....||.::||:.....:|:..|.|.|:   ....::.|..||.|  .||...:    
Mosquito   213 NCLELRKNVEYGRHVVATRKLKVGDVVMIERPLVT---VLKDSFRYVRCDFCHGERPFTLI---- 270

  Fly    65 RRLASDPKVEVPLLQHDPTAQWVAQFTQCPRCKV-RYCSEDCLMEAQKRYHRVACMGAFHSDDTH 128
                                       .|..|.: .||||:||.:|..:|||..|          
Mosquito   271 ---------------------------PCEGCTMAMYCSEECLSKAYNKYHRYEC---------- 298

  Fly   129 PINVLNETWKKMHYPPETGSIMLIVRLMALYQQS--TKKEEFLEQLQSFQSLIVN---------R 182
              .:|.:.|:.....|     ::.:|::|:...:  ...|...:.|.:.....||         .
Mosquito   299 --GLLRDLWEVFEEVP-----LIAIRMIAIAIATFDNNPETLKDHLNALDESNVNGFTMDWNKAT 356

  Fly   183 EQKIYH--KMLGENFEQQMEQLYLAF---------------------CNAFTGEEFSIFKTPDAF 224
            :|.|::  .:|..| :::.:.:::||                     |.|  ...|:.|.. |..
Mosquito   357 QQDIFNTVHVLTTN-QERRDSIFVAFHIFNATILHTLILERTELGPVCGA--NPAFNKFLL-DLI 417

  Fly   225 KTLMAILGTNSQGIATSVLSQWVAKVSDLPLTDSEKEQLDTVIDGLYAKVGEFAGEFLNNEGSGL 289
            ...|.|:..|.:.::.:..                             ||.|:..|   :...|.
Mosquito   418 LRYMQIVNCNRKLLSFNAY-----------------------------KVKEYVAE---SFAVGC 450

  Fly   290 YLLQSKINHSCVPNA---------CSTFPYSNDIVVLKALAPIQQGEEICISYLDECMLERSRHS 345
            |.|.|.:||||.||.         |:.|          .:.|:.:|.::..||.....| ..|..
Mosquito   451 YPLISMLNHSCAPNVQRITLRDGRCAVF----------VIRPVLEGSQLFDSYETGHTL-HEREM 504

  Fly   346 RHKVLRENYVFICQCPKC-------RAQASDPDETSEDD 377
            |..:|...|.|.|.|..|       :......|.|:.:|
Mosquito   505 RQSMLSFMYSFQCTCEACTFNYPTWKVLLEGSDVTNSED 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd5NP_650955.1 SET_SMYD5 3..366 CDD:380919 81/415 (20%)
zf-MYND 87..118 CDD:460312 12/31 (39%)
LOC1270660XP_061511731.1 None

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