DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and KING1

DIOPT Version :10

Sequence 1:NP_732598.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_190422.1 Gene:KING1 / 824012 AraportID:AT3G48530 Length:424 Species:Arabidopsis thaliana


Alignment Length:394 Identity:81/394 - (20%)
Similarity:156/394 - (39%) Gaps:87/394 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   900 GLPVADPFLE-KVNLSDLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDTQLL-------VKKAF 956
            |:.|.|.:.| |..||..|           :.:.|::.||.||..:..|:|.:       :.:|.
plant    29 GMRVEDLWDEQKPQLSPNE-----------KLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAV 82

  Fly   957 YALVYNGVRAAPLWDSEK-------QQFVGMLTITDFIKIL--QMYYKSP--------NASMEQL 1004
            ..|....|.:||:.|.:.       .:::|::.....:..|  |:...||        |......
plant    83 QTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQLEPPSPRSPAVAASNGFSHDF 147

  Fly  1005 EEHKLDTWRSVLHN----QVM---------------------PLVSIGPDASLYDAIKILIHSRI 1044
            ....||...|.:.:    :|:                     |.:::..:.|....:.:|...::
plant   148 TTDVLDNGDSAVTSGNFFEVLTSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKM 212

  Fly  1045 HRLPVIDPATGNVLYILTHKRILRFL-----FLYINELPKPAYMQKSLRE--LKIGTYNNIETAD 1102
            ..:||:|.....:..|:|...::..|     .|:..:     :..|:|.|  |.|.:.::|....
plant   213 KSIPVVDLGVAKIENIITQSGVIHMLAECAGLLWFED-----WGIKTLSEVGLPIMSKDHIIKIY 272

  Fly  1103 ETTSIITALKKFVERRVSALPLVD--SDGRLVDIYAKFDVINLAAEKTYNDLD--------VSLR 1157
            |...::.|.|....:|:..:|:::  |:..:.:|..:.....|.|.:.|:|..        ||:|
plant   273 EDEPVLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVR 337

  Fly  1158 ----KANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRKVIGIISLSDILLYLVL 1218
                |..:.......||..|..:.:|..::..:...::||:.|||:...:.|:|:|.||:..||.
plant   338 EHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITLRDIIARLVH 402

  Fly  1219 RPSG 1222
            .|||
plant   403 EPSG 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_732598.1 CBS_euAMPK_gamma-like_repeat1 932..1068 CDD:341388 31/184 (17%)
CBS repeat 940..1013 CDD:341388 18/96 (19%)
CBS repeat 1024..1068 CDD:341388 7/43 (16%)
CBS_euAMPK_gamma-like_repeat2 1094..1217 CDD:341399 30/136 (22%)
CBS repeat 1095..1160 CDD:341399 16/78 (21%)
CBS repeat 1171..1214 CDD:341399 12/42 (29%)
KING1NP_190422.1 COG3448 72..240 CDD:442671 25/167 (15%)
CBS_pair_SF 72..>97 CDD:449531 5/24 (21%)
CBS_pair_SF 206..311 CDD:449531 21/109 (19%)
COG3448 262..403 CDD:442671 33/140 (24%)
CBS repeat 268..311 CDD:341405 8/42 (19%)

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