DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and prkag3b

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_001035456.2 Gene:prkag3b / 678619 ZFINID:ZDB-GENE-060421-6938 Length:342 Species:Danio rerio


Alignment Length:323 Identity:182/323 - (56%)
Similarity:241/323 - (74%) Gaps:6/323 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   906 PFLEKVNLS-----DLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDTQLLVKKAFYALVYNGVR 965
            ||:|...|:     .|::.|:.::.|||..|.|||.||||:|||||||.|.|||||:|||.||||
Zfish    14 PFMEDEGLTMKRTGPLQDPDADVYAKFFMSHCCYDAIPTSSKLVVFDTTLQVKKAFFALVANGVR 78

  Fly   966 AAPLWDSEKQQFVGMLTITDFIKILQMYYKSPNASMEQLEEHKLDTWR-SVLHNQVMPLVSIGPD 1029
            ||||||.:.|.|||||||||||.||..|||||...:.:|||||::||| :.|...|..|:||.||
Zfish    79 AAPLWDDKLQCFVGMLTITDFINILHRYYKSPLVQIYELEEHKIETWRETYLQYSVTSLISIAPD 143

  Fly  1030 ASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRFLFLYINELPKPAYMQKSLRELKIGT 1094
            :||::||..|:.::|||||||||.|||||:||||||||:||.::.:.:|||.::||.:.|::|||
Zfish   144 SSLFEAIYSLLKNKIHRLPVIDPETGNVLHILTHKRILKFLHIFGSMIPKPRFLQKRIEEVEIGT 208

  Fly  1095 YNNIETADETTSIITALKKFVERRVSALPLVDSDGRLVDIYAKFDVINLAAEKTYNDLDVSLRKA 1159
            :.:|.|..||.::..||..||||||||||:|:..|::|.:|::||||||||:||||.|::::.:|
Zfish   209 FKSIATVKETETVYDALTIFVERRVSALPVVNEQGKVVALYSRFDVINLAAQKTYNHLNMTMAEA 273

  Fly  1160 NEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRKVIGIISLSDILLYLVLRPSG 1222
            .:.|....|||.||...|:|.|:::||..|||||||:||....|.||:||||:|..|||.|:|
Zfish   274 IQGRWCCIEGVLKCYPHETLETVIDRIAEAEVHRLVLVDTEDVVRGIVSLSDLLQALVLTPAG 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 87/128 (68%)
CBS 952..1067 CDD:223591 77/115 (67%)
CBS 1023..1141 CDD:223591 65/117 (56%)
CBS_pair_28 1097..1215 CDD:240012 62/117 (53%)
CBS 1097..1213 CDD:223591 61/115 (53%)
prkag3bNP_001035456.2 CBS_pair_5 54..183 CDD:239990 87/128 (68%)
CBS 135..255 CDD:223591 65/119 (55%)
CBS_pair_28 210..329 CDD:240012 62/118 (53%)
CBS 210..327 CDD:223591 61/116 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10121
eggNOG 1 0.900 - - E1_COG0517
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 1 1.000 - - otm25595
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13780
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4230
SonicParanoid 1 1.000 - - X716
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.900

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