DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and prkag3a

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:XP_005160349.1 Gene:prkag3a / 553319 ZFINID:ZDB-GENE-091204-419 Length:349 Species:Danio rerio


Alignment Length:345 Identity:181/345 - (52%)
Similarity:244/345 - (70%) Gaps:23/345 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   884 GTLDPHHAAILFRDSRGLPVADPFLEKVNLSDLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDT 948
            ||.|..|...|                ||::|| :.:::.::.|.:.|.|||.||||.|||:|||
Zfish    16 GTQDDCHEDCL----------------VNITDL-DPNAETYMNFMKKHCCYDAIPTSCKLVIFDT 63

  Fly   949 QLLVKKAFYALVYNGVRAAPLWDSEKQQFVGMLTITDFIKILQMYYKSPNASMEQLEEHKLDTWR 1013
            .|.|||||:|||.||:|||||||.:.|:|||||||||||.||..||:||...:.:|||||::|||
Zfish    64 TLQVKKAFFALVANGLRAAPLWDHKLQRFVGMLTITDFINILHRYYRSPMVQIYELEEHKIETWR 128

  Fly  1014 S------VLHNQVMPLVSIGPDASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRFLFL 1072
            .      .|..|...|:||.|||||:||:..|:..:|||||||||.:||||:||||||||:||.:
Zfish   129 GDSFQNVYLQYQDQCLISITPDASLFDAVYSLLKHKIHRLPVIDPESGNVLHILTHKRILKFLHI 193

  Fly  1073 YINELPKPAYMQKSLRELKIGTYNNIETADETTSIITALKKFVERRVSALPLVDSDGRLVDIYAK 1137
            :...:|||.:::..::|..|||:.::.|..:|.::..||..||||||||||:||.||::|.:|::
Zfish   194 FGTTVPKPRFLKMQIKEAGIGTFRDVATVSQTATVYDALSVFVERRVSALPVVDDDGKVVALYSR 258

  Fly  1138 FDVINLAAEKTYNDLDVSLRKANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRK 1202
            ||||||||:||||:|.:|:::|...|..:.|||.||..||:|.|:::|||:|||||||:||....
Zfish   259 FDVINLAAQKTYNNLSMSMQEAVRRRRCYVEGVIKCYPDETLETVIDRIVKAEVHRLVLVDREDV 323

  Fly  1203 VIGIISLSDILLYLVLRPSG 1222
            |.|||||||:|..:||.|:|
Zfish   324 VRGIISLSDLLQAIVLSPAG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 84/133 (63%)
CBS 952..1067 CDD:223591 75/120 (63%)
CBS 1023..1141 CDD:223591 63/117 (54%)
CBS_pair_28 1097..1215 CDD:240012 66/117 (56%)
CBS 1097..1213 CDD:223591 65/115 (57%)
prkag3aXP_005160349.1 CBS_pair_5 57..190 CDD:239990 84/132 (64%)
CBS 67..188 CDD:223591 75/120 (63%)
CBS 144..262 CDD:223591 63/117 (54%)
CBS_pair_28 217..336 CDD:240012 66/118 (56%)
CBS 217..334 CDD:223591 65/116 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10121
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13780
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X716
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.010

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