DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and prkag1

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_998326.1 Gene:prkag1 / 406440 ZFINID:ZDB-GENE-040426-2188 Length:330 Species:Danio rerio


Alignment Length:325 Identity:195/325 - (60%)
Similarity:248/325 - (76%) Gaps:1/325 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   901 LPVADPFLEKVNLSDLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDTQLLVKKAFYALVYNGVR 965
            ||.....|:....:.:|:.:..::.:|.:.|:||||:|||:|||||||.|.|||||:|||.||||
Zfish     4 LPAVLDDLDCKKEAHIEDPEFNVYTRFMKSHRCYDLVPTSSKLVVFDTSLQVKKAFFALVSNGVR 68

  Fly   966 AAPLWDSEKQQFVGMLTITDFIKILQMYYKSPNASMEQLEEHKLDTWRSV-LHNQVMPLVSIGPD 1029
            |||||||:||.|||||||||||.||..|||||...:.:|||||::|||.| |.:...|||||.|:
Zfish    69 AAPLWDSKKQCFVGMLTITDFINILHRYYKSPLVQIYELEEHKIETWREVYLQDSFKPLVSISPN 133

  Fly  1030 ASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRFLFLYINELPKPAYMQKSLRELKIGT 1094
            ||||||:..|:..:|||||||||.|||.||||||||||:||.|:|:|:||||::.::|.||.|||
Zfish   134 ASLYDAVSSLLKHKIHRLPVIDPLTGNALYILTHKRILKFLKLFISEIPKPAFLSQTLEELNIGT 198

  Fly  1095 YNNIETADETTSIITALKKFVERRVSALPLVDSDGRLVDIYAKFDVINLAAEKTYNDLDVSLRKA 1159
            ::||......|.:..||..|||:||||||:||.:||:||||:||||||||||||||:||:::.||
Zfish   199 FDNIAVVHSDTPLYAALGIFVEQRVSALPVVDENGRVVDIYSKFDVINLAAEKTYNNLDITVTKA 263

  Fly  1160 NEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRKVIGIISLSDILLYLVLRPSGEG 1224
            .:||:::||||..|...|:|..|:.|:|.|||||||:|||...|.||:||||||..|||....:|
Zfish   264 LQHRSQYFEGVLTCRASETLQAIINRLVEAEVHRLVIVDEQEVVKGIVSLSDILQALVLTSGDDG 328

  Fly  1225  1224
            Zfish   329  328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 92/128 (72%)
CBS 952..1067 CDD:223591 82/115 (71%)
CBS 1023..1141 CDD:223591 74/117 (63%)
CBS_pair_28 1097..1215 CDD:240012 71/117 (61%)
CBS 1097..1213 CDD:223591 69/115 (60%)
prkag1NP_998326.1 CBS_pair_5 44..173 CDD:239990 92/128 (72%)
CBS 125..245 CDD:223591 75/119 (63%)
CBS_pair_28 200..319 CDD:240012 71/118 (60%)
CBS 200..317 CDD:223591 69/116 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8598
eggNOG 1 0.900 - - E1_COG0517
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 1 1.000 - - otm25595
orthoMCL 1 0.900 - - OOG6_101734
Panther 1 1.100 - - LDO PTHR13780
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4230
SonicParanoid 1 1.000 - - X716
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.800

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