DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and aakg-1

DIOPT Version :10

Sequence 1:NP_732598.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_001368643.1 Gene:aakg-1 / 3565679 WormBaseID:WBGene00013732 Length:801 Species:Caenorhabditis elegans


Alignment Length:870 Identity:294/870 - (33%)
Similarity:420/870 - (48%) Gaps:168/870 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 LRSESSASTTSP-SRQLTNSGSVSVSVSDDEQDGSLGGAGRMPGSRPSSAPAEPNAKAAKKAYKK 588
            ||..|:.|.||| :|.:.:..||.|...:.:|..:.|      ..||.:..|.|.....      
 Worm     4 LRQSSATSPTSPVARNVYSRASVDVETGEIQQQQNSG------HKRPYTPGASPREILC------ 56

  Fly   589 MEKEQRRQEKEQSRREKEARKLERETARRNEREAAKLEKINRHSEKISRSTERMAMAGV------ 647
             .::..||....|:......:. .:..||..|:|:    :|..||.:  ..|.:....|      
 Worm    57 -AQQSLRQLPSPSQTSPHGSRF-MDGYRRRMRQAS----LNLPSETL--LDEDLGFPPVCSPPPE 113

  Fly   648 ---GSRSGSLERRRS-GEDSPVLNQSTVHGIASPNRRPTIFDVFRPRAKSDAKRQKEKHLLD--- 705
               ||..|:..|.|| .|..|.|...:.|.:.:..     ..||.|.:.|.:. ....|||.   
 Worm   114 VFCGSIVGNQMRNRSNSEAQPGLRMRSSHSLGNGG-----LLVFFPTSPSSSS-NNSGHLLQHRR 172

  Fly   706 PSSADSSATSS-TYSVSGGT-------------------------GPATSSAAGGA--------- 735
            .|..|.:|..: .:|.:..|                         .|....||||:         
 Worm   173 ESHTDETAEEAIIWSTNNDTSDEMMDETSCCMVADDISMKDVEMPSPIIGGAAGGSKSLKRPPDL 237

  Fly   736 -GGAAAAAGQGAAGGA-GGLMNSMKVAMQNFSHRQHPAVTITSADGTQSTAKSKYKDGSAHPHQG 798
             |...:.:...::||| .|:..|......::|.|..|....|.               .|:..|.
 Worm   238 NGSNNSGSSSSSSGGANSGVQQSSVHPSNSYSPRSRPLFVDTQ---------------MANHLQD 287

  Fly   799 SDAQYYHTVTAVRPNSSQRSPMTKVMDLFRHR--------SSSVVSEADKRKARAAAH------- 848
            |             |..:|||:::|:|..|.|        |||.:.......|||:|.       
 Worm   288 S-------------NMKRRSPVSQVVDFVRGRNRTYSLQLSSSPMCSPQSVAARASASCDGCNGP 339

  Fly   849 --QQQLAVQSAHMRRASADLEKRRASVGAAGRGLRGDGTLD---P--HHAAILFR--------DS 898
              ..|....|...||.:......|||..|.|.....|..||   |  :|.|:|.:        ||
 Worm   340 PPPPQPIGMSPSGRRQTISGRVHRASFTAGGTLKSFDSGLDLSSPTINHTALLIKEASLFSSFDS 404

  Fly   899 RGLPVADPFLEKVNLSDLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDTQLLVKKAFYALVYNG 963
            ..:..|.|   .:|....:..|: ::..|.:.||||||||||:|||||||.|.|:||||||||||
 Worm   405 MSIGTAVP---DINAIFFDNHDA-VYSLFMKAHKCYDLIPTSSKLVVFDTHLPVRKAFYALVYNG 465

  Fly   964 VRAAPLWDSEKQQFVGMLTITDFIKILQMYY-KSPNAS-MEQLEEHKLDTWRS--VLHNQVMPLV 1024
            ||||||||::.|:|.||||||||||||..:| |..|:. :..||:.::..||.  .|...:.|.|
 Worm   466 VRAAPLWDTDNQRFTGMLTITDFIKILCKHYDKGDNSERIRALEDQQISHWRDQFELDGTLRPFV 530

  Fly  1025 SIGPDASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRFLFLYINELPKPAYMQKSLRE 1089
            .|.|:.||:.|:::|..|::|||||:|..|||:.||||||||::||.||:.:||:|::|..:.||
 Worm   531 YIDPNESLHRAVELLCESKVHRLPVLDRKTGNITYILTHKRIMKFLSLYMRDLPRPSFMSCTPRE 595

  Fly  1090 LKIGTYNNIETADETTSIITALKKFVERRVSALPLVDSDGRLVDIYAKFDVINLAAEKTYNDLDV 1154
            |.||.:.:|......|.|..||:.|::.|||||||:|.:||:||||||||||:||||.:|:.||.
 Worm   596 LGIGAWGDILCCHVDTPIHDALELFLKNRVSALPLIDENGRVVDIYAKFDVISLAAESSYDKLDC 660

  Fly  1155 SLRKANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRKVIGIISLSDILLYLVLR 1219
            ::::|.:||:|||||||.|...:||:.::|.||:||||||:|.|:::||:|::||||||..|||.
 Worm   661 TVQEALQHRSEWFEGVQTCLETDSLFQVLEAIVKAEVHRLIVTDQDKKVVGVVSLSDILKNLVLD 725

  Fly  1220 P----------SGEGVGGSESSLRASDPVLLRKVAEVEIPATAAAATTTTPPRSPSAGSGNRSLI 1274
            |          |.:..||...:..||.            .:|..|:::.:||.|...|.   .:.
 Worm   726 PCQKPPPPPPQSQQAGGGGPPTRNASG------------TSTGGASSSDSPPHSIPEGI---EVE 775

  Fly  1275 EDIPEEETAPARSDDADSDNNKSAS 1299
            :|..::|.||..|.|..:....||:
 Worm   776 DDDDDDEEAPPPSIDCSTPGPSSAA 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_732598.1 CBS_euAMPK_gamma-like_repeat1 932..1068 CDD:341388 84/139 (60%)
CBS repeat 940..1013 CDD:341388 47/74 (64%)
CBS repeat 1024..1068 CDD:341388 25/43 (58%)
CBS_euAMPK_gamma-like_repeat2 1094..1217 CDD:341399 66/122 (54%)
CBS repeat 1095..1160 CDD:341399 33/64 (52%)
CBS repeat 1171..1214 CDD:341399 23/42 (55%)
aakg-1NP_001368643.1 CBS_euAMPK_gamma-like_repeat1 434..574 CDD:341388 84/139 (60%)
CBS repeat 442..517 CDD:341388 47/74 (64%)
CBS repeat 530..574 CDD:341388 25/43 (58%)
CBS_euAMPK_gamma-like_repeat2 601..723 CDD:341399 66/121 (55%)
CBS repeat 601..666 CDD:341399 33/64 (52%)
CBS repeat 677..720 CDD:341399 23/42 (55%)

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