DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and Prkag3

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_001100391.1 Gene:Prkag3 / 301518 RGDID:1308698 Length:493 Species:Rattus norvegicus


Alignment Length:424 Identity:183/424 - (43%)
Similarity:264/424 - (62%) Gaps:48/424 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   832 SSVVSEADKRKA---RAAAHQQQLAVQSAHMRRASADLEKRRASVGAAG---------------- 877
            |...:|:.::||   :|....|.:.:..|.......||.....:..|.|                
  Rat    79 SGPAAESTRQKATFPKATPLAQAVPLADAETSTTGWDLFLPDCAASAVGSSTGDLELTIEFPGPE 143

  Fly   878 ------RGLRGDGTLDPHHAAILFRDSRGLPVADPFLEKVNLS---DLEEDDSQIFVKFFRFHKC 933
                  :||..|               |..|...|....::||   :|::..:||::.|.:.|.|
  Rat   144 VWDCELKGLEQD---------------RPRPCPSPQAPLLSLSWDDELQKPGAQIYMHFMQEHTC 193

  Fly   934 YDLIPTSAKLVVFDTQLLVKKAFYALVYNGVRAAPLWDSEKQQFVGMLTITDFIKILQMYYKSPN 998
            ||.:.||:|||:|||.|.:||||:|:|.|||||||||||:||.|||||||||||.:|..||:||.
  Rat   194 YDAMATSSKLVIFDTTLEIKKAFFAMVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRYYRSPL 258

  Fly   999 ASMEQLEEHKLDTWRS-----VLHNQVMPLVSIGPDASLYDAIKILIHSRIHRLPVIDPATGNVL 1058
            ..:.::||||::|||.     .|.....|||||.|:.||::|:..||.:|||||||:||.:|.||
  Rat   259 VQIYEIEEHKIETWRGFSAEIYLQGCFKPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSGTVL 323

  Fly  1059 YILTHKRILRFLFLYINELPKPAYMQKSLRELKIGTYNNIETADETTSIITALKKFVERRVSALP 1123
            |||||||:|:||.::...||:|:::.:::::|.|||:.::....||..|:|||..||:|||||||
  Rat   324 YILTHKRLLKFLHIFGALLPRPSFLCRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALP 388

  Fly  1124 LVDSDGRLVDIYAKFDVINLAAEKTYNDLDVSLRKANEHRNEWFEGVQKCNLDESLYTIMERIVR 1188
            :|:..|::|.:|::||||:|||::|||.||:|:.:|...|....|||..|...|||..:::||.|
  Rat   389 VVNESGQVVGLYSRFDVIHLAAQQTYNHLDMSVGEALRQRTLCLEGVLSCQPHESLGEVIDRIAR 453

  Fly  1189 AEVHRLVVVDENRKVIGIISLSDILLYLVLRPSG 1222
            .:|||||:|||.:.::|::||||||..|||.|:|
  Rat   454 EQVHRLVLVDETQHLLGVVSLSDILQALVLSPAG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 81/132 (61%)
CBS 952..1067 CDD:223591 73/119 (61%)
CBS 1023..1141 CDD:223591 60/117 (51%)
CBS_pair_28 1097..1215 CDD:240012 59/117 (50%)
CBS 1097..1213 CDD:223591 57/115 (50%)
Prkag3NP_001100391.1 CBS_pair_5 201..334 CDD:239990 81/132 (61%)
CBS 207..332 CDD:223591 76/124 (61%)
CBS 286..406 CDD:223591 61/119 (51%)
CBS_pair_28 361..480 CDD:240012 59/118 (50%)
CBS 361..478 CDD:223591 57/116 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8552
eggNOG 1 0.900 - - E1_COG0517
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 1 1.000 - - otm44607
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13780
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X716
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.870

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