DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and Prkag3

DIOPT Version :10

Sequence 1:NP_732598.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_714966.1 Gene:Prkag3 / 241113 MGIID:1891343 Length:489 Species:Mus musculus


Alignment Length:478 Identity:192/478 - (40%)
Similarity:285/478 - (59%) Gaps:61/478 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   805 HTVTAVRPNSSQRSPMTKVMDLFRHRSSS-----VVSEADK----RKARAAAHQQQLAVQSAH-- 858
            ||:......|....|.::.||......:|     |.:.:::    |..:|:...:|.||:.|.  
Mouse     7 HTLPGTLTWSHSGGPESQEMDFLEQGENSWPSPAVATSSERTCAIRGVKASRWTRQEAVEEAEPP 71

  Fly   859 ------MRRASADLEKRRAS------------------------------VGAAGRGLRGDGTLD 887
                  ..|.:|:..::.|:                              ..:||....||..|.
Mouse    72 GLGEGAQSRPAAESTRQEATFPKATPLAQAVPLAEAETSPTGWDLLLPDCAASAGGSSTGDLELT 136

  Fly   888 PHHAAI---------LFRDSRGLPVADPFLEKVNLS---DLEEDDSQIFVKFFRFHKCYDLIPTS 940
            ....|.         |.:| |..|...|....:.||   :|::..:|:::.|.:.|.|||.:.||
Mouse   137 IEFPAPEAWDCELEGLGKD-RPRPGPSPQAPLLGLSWDDELQKPGAQVYMHFMQEHTCYDAMATS 200

  Fly   941 AKLVVFDTQLLVKKAFYALVYNGVRAAPLWDSEKQQFVGMLTITDFIKILQMYYKSPNASMEQLE 1005
            :|||:|||.|.:||||:|:|.|||||||||||:||.|||||||||||.:|..||:||...:.::|
Mouse   201 SKLVIFDTTLEIKKAFFAMVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRYYRSPLVQIYEIE 265

  Fly  1006 EHKLDTWRSV-LHNQVMPLVSIGPDASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRF 1069
            |||::|||.: |.....|||||.|:.||::|:..||.:|||||||:||.:|.|||||||||:|:|
Mouse   266 EHKIETWREIYLQGCFKPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSGTVLYILTHKRLLKF 330

  Fly  1070 LFLYINELPKPAYMQKSLRELKIGTYNNIETADETTSIITALKKFVERRVSALPLVDSDGRLVDI 1134
            |.::...||:|:::.:::::|.|||:.::....||..::|||..||:|||||||:|:..|::|.:
Mouse   331 LHIFGALLPRPSFLCRTIQDLGIGTFRDLAVVLETAPVLTALDIFVDRRVSALPVVNESGQVVGL 395

  Fly  1135 YAKFDVINLAAEKTYNDLDVSLRKANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDE 1199
            |::||||:|||::|||.||:|:.:|...|....|||..|...|||..:::||.|.:|||||:|||
Mouse   396 YSRFDVIHLAAQQTYNHLDMSVGEALRQRTLCLEGVLSCQPHESLGEVIDRIAREQVHRLVLVDE 460

  Fly  1200 NRKVIGIISLSDILLYLVLRPSG 1222
            .:.::|::||||||..|||.|:|
Mouse   461 TQHLLGVVSLSDILQALVLSPAG 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_732598.1 CBS_euAMPK_gamma-like_repeat1 932..1068 CDD:341388 85/136 (63%)
CBS repeat 940..1013 CDD:341388 48/72 (67%)
CBS repeat 1024..1068 CDD:341388 28/43 (65%)
CBS_euAMPK_gamma-like_repeat2 1094..1217 CDD:341399 59/122 (48%)
CBS repeat 1095..1160 CDD:341399 31/64 (48%)
CBS repeat 1171..1214 CDD:341399 21/42 (50%)
Prkag3NP_714966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 17/87 (20%)
CBS_euAMPK_gamma-like_repeat1 192..329 CDD:341388 85/136 (63%)
CBS repeat 200..273 CDD:341388 48/72 (67%)
CBS repeat 285..329 CDD:341388 28/43 (65%)
AMPK pseudosubstrate 293..314 12/20 (60%)
CBS_euAMPK_gamma-like_repeat2 355..478 CDD:341399 59/122 (48%)
CBS repeat 356..421 CDD:341399 31/64 (48%)
CBS repeat 432..475 CDD:341399 21/42 (50%)

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