DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and Prkag3

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_714966.1 Gene:Prkag3 / 241113 MGIID:1891343 Length:489 Species:Mus musculus


Alignment Length:478 Identity:192/478 - (40%)
Similarity:285/478 - (59%) Gaps:61/478 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   805 HTVTAVRPNSSQRSPMTKVMDLFRHRSSS-----VVSEADK----RKARAAAHQQQLAVQSAH-- 858
            ||:......|....|.::.||......:|     |.:.:::    |..:|:...:|.||:.|.  
Mouse     7 HTLPGTLTWSHSGGPESQEMDFLEQGENSWPSPAVATSSERTCAIRGVKASRWTRQEAVEEAEPP 71

  Fly   859 ------MRRASADLEKRRAS------------------------------VGAAGRGLRGDGTLD 887
                  ..|.:|:..::.|:                              ..:||....||..|.
Mouse    72 GLGEGAQSRPAAESTRQEATFPKATPLAQAVPLAEAETSPTGWDLLLPDCAASAGGSSTGDLELT 136

  Fly   888 PHHAAI---------LFRDSRGLPVADPFLEKVNLS---DLEEDDSQIFVKFFRFHKCYDLIPTS 940
            ....|.         |.:| |..|...|....:.||   :|::..:|:::.|.:.|.|||.:.||
Mouse   137 IEFPAPEAWDCELEGLGKD-RPRPGPSPQAPLLGLSWDDELQKPGAQVYMHFMQEHTCYDAMATS 200

  Fly   941 AKLVVFDTQLLVKKAFYALVYNGVRAAPLWDSEKQQFVGMLTITDFIKILQMYYKSPNASMEQLE 1005
            :|||:|||.|.:||||:|:|.|||||||||||:||.|||||||||||.:|..||:||...:.::|
Mouse   201 SKLVIFDTTLEIKKAFFAMVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRYYRSPLVQIYEIE 265

  Fly  1006 EHKLDTWRSV-LHNQVMPLVSIGPDASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRF 1069
            |||::|||.: |.....|||||.|:.||::|:..||.:|||||||:||.:|.|||||||||:|:|
Mouse   266 EHKIETWREIYLQGCFKPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSGTVLYILTHKRLLKF 330

  Fly  1070 LFLYINELPKPAYMQKSLRELKIGTYNNIETADETTSIITALKKFVERRVSALPLVDSDGRLVDI 1134
            |.::...||:|:::.:::::|.|||:.::....||..::|||..||:|||||||:|:..|::|.:
Mouse   331 LHIFGALLPRPSFLCRTIQDLGIGTFRDLAVVLETAPVLTALDIFVDRRVSALPVVNESGQVVGL 395

  Fly  1135 YAKFDVINLAAEKTYNDLDVSLRKANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDE 1199
            |::||||:|||::|||.||:|:.:|...|....|||..|...|||..:::||.|.:|||||:|||
Mouse   396 YSRFDVIHLAAQQTYNHLDMSVGEALRQRTLCLEGVLSCQPHESLGEVIDRIAREQVHRLVLVDE 460

  Fly  1200 NRKVIGIISLSDILLYLVLRPSG 1222
            .:.::|::||||||..|||.|:|
Mouse   461 TQHLLGVVSLSDILQALVLSPAG 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 81/128 (63%)
CBS 952..1067 CDD:223591 73/115 (63%)
CBS 1023..1141 CDD:223591 59/117 (50%)
CBS_pair_28 1097..1215 CDD:240012 58/117 (50%)
CBS 1097..1213 CDD:223591 56/115 (49%)
Prkag3NP_714966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 17/87 (20%)
CBS_euAMPK_gamma-like_repeat1 192..329 CDD:341388 85/136 (63%)
CBS repeat 200..273 CDD:341388 48/72 (67%)
CBS repeat 285..329 CDD:341388 28/43 (65%)
AMPK pseudosubstrate 293..314 12/20 (60%)
CBS_euAMPK_gamma-like_repeat2 355..478 CDD:341399 59/122 (48%)
CBS repeat 356..421 CDD:341399 31/64 (48%)
CBS repeat 432..475 CDD:341399 21/42 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8741
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 1 1.000 - - otm42542
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13780
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4230
SonicParanoid 1 1.000 - - X716
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.040

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