DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and Prkag1

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:NP_058061.2 Gene:Prkag1 / 19082 MGIID:108411 Length:330 Species:Mus musculus


Alignment Length:327 Identity:203/327 - (62%)
Similarity:247/327 - (75%) Gaps:7/327 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   904 ADPFLEKVNLSDLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDTQLLVKKAFYALVYNGVRAAP 968
            :.|.||..:..:..|.::.::..|.:.|:||||||||:|||||||.|.|||||:|||.|||||||
Mouse     8 SSPALENEHFQETPESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAP 72

  Fly   969 LWDSEKQQFVGMLTITDFIKILQMYYKSPNASMEQLEEHKLDTWRSV-LHNQVMPLVSIGPDASL 1032
            ||||:||.|||||||||||.||..||||....:.:|||||::|||.| |.:...|||.|.|:|||
Mouse    73 LWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASL 137

  Fly  1033 YDAIKILIHSRIHRLPVIDPATGNVLYILTHKRILRFLFLYINELPKPAYMQKSLRELKIGTYNN 1097
            :||:..||.::|||||||||.:||.||||||||||:||.|:|.|.|||.:|.|||:||:||||.|
Mouse   138 FDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLQELQIGTYAN 202

  Fly  1098 IETADETTSIITALKKFVERRVSALPLVDSDGRLVDIYAKFDVINLAAEKTYNDLDVSLRKANEH 1162
            |.....||.:..||..||:.||||||:||..||:||||:||||||||||||||:||||:.||.:|
Mouse   203 IAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH 267

  Fly  1163 RNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRKVIGIISLSDILLYLVLRPSGEGVGG 1227
            |:.:||||.||.|.|:|.||:.|:|.|||||||||||:..|.||:||||||..|||      .||
Mouse   268 RSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL------TGG 326

  Fly  1228 SE 1229
            .:
Mouse   327 EK 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 89/128 (70%)
CBS 952..1067 CDD:223591 79/115 (69%)
CBS 1023..1141 CDD:223591 75/117 (64%)
CBS_pair_28 1097..1215 CDD:240012 77/117 (66%)
CBS 1097..1213 CDD:223591 75/115 (65%)
Prkag1NP_058061.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 3/12 (25%)
CBS_pair_5 45..174 CDD:239990 89/128 (70%)
AMPK pseudosubstrate 137..158 13/20 (65%)
CBS_pair_28 201..320 CDD:240012 77/118 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8741
eggNOG 1 0.900 - - E1_COG0517
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1437
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 1 1.000 - - otm42542
orthoMCL 1 0.900 - - OOG6_101734
Panther 1 1.100 - - LDO PTHR13780
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4230
SonicParanoid 1 1.000 - - X716
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.750

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