DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and Prkag2

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:XP_006535674.1 Gene:Prkag2 / 108099 MGIID:1336153 Length:567 Species:Mus musculus


Alignment Length:612 Identity:252/612 - (41%)
Similarity:343/612 - (56%) Gaps:119/612 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 LEKINRHSEKISRSTERMAMAGVGSRS----GSLERRRSGEDSPVLNQSTVHGIASPNRRPTIFD 685
            :|...:||   ||..:....:|..||.    |...|..|...:||..::      ||....|:|.
Mouse    52 VENSEKHS---SRKVDSPFSSGSPSRGLFSRGPQPRPSSPVSAPVRPKT------SPGSPKTVFP 107

  Fly   686 V-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAAGG 749
            . ::.......:|.....:...||.:||..|:         |:||                    
Mouse   108 FSYQESPPRSPRRMSFSGIFRSSSKESSPNSN---------PSTS-------------------- 143

  Fly   750 AGGLMNSMKVAMQNFSHRQHPAVTITSADGTQSTAKSK-------YKDGSAHPHQGSDAQYYHTV 807
            .||:         .|..|.....:::|:..|.:....:       ||.....|    :::.|  .
Mouse   144 PGGI---------RFFSRSRKTSSVSSSPSTPTQVTKQHPFPLESYKQEPERP----ESRIY--A 193

  Fly   808 TAVRPNSSQRSPMTKVMDLFRHRSSSVVSEADKRKARAAAHQQQLAVQSAHMRRASADLEKRRAS 872
            ::..|::.||..:                 |.:..||     ..||..:.|     |.|   |.:
Mouse   194 SSSPPDTGQRFCL-----------------AFQSPAR-----PPLASPTYH-----APL---RTA 228

  Fly   873 VGAAGRGLRGDGTLDPHHAAILFRDSRGLPVADPFLEKVNLSDLEED-DSQIFVKFFRFHKCYDL 936
            |.||..|                      |.....|||:...:..|| :|.::::|.|.|||||:
Mouse   229 VLAAAPG----------------------PAEAGMLEKLEFQEEAEDSESGVYMRFMRSHKCYDI 271

  Fly   937 IPTSAKLVVFDTQLLVKKAFYALVYNGVRAAPLWDSEKQQFVGMLTITDFIKILQMYYKSPNASM 1001
            :|||:|||||||.|.|||||:|||.|||||||||:|:||.|||||||||||.||..|||||...:
Mouse   272 VPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQI 336

  Fly  1002 EQLEEHKLDTWRSV-LHNQVMPLVSIGPDASLYDAIKILIHSRIHRLPVIDPATGNVLYILTHKR 1065
            .:|||||::|||.: |.....|||:|.|||||:||:..||.::|||||||||.:||.||||||||
Mouse   337 YELEEHKIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKR 401

  Fly  1066 ILRFLFLYINELPKPAYMQKSLRELKIGTYNNIETADETTSIITALKKFVERRVSALPLVDSDGR 1130
            ||:||.|:::::||||:|:::|.||.||||:||......|.||.||..|||||:||||:||..|:
Mouse   402 ILKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGK 466

  Fly  1131 LVDIYAKFDVINLAAEKTYNDLDVSLRKANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLV 1195
            :||||:||||||||||||||:||:::.:|.:||:::||||.||:..|:|.||::|||||||||||
Mouse   467 VVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCSKLETLETIVDRIVRAEVHRLV 531

  Fly  1196 VVDENRKVIGIISLSDILLYLVLRPSG 1222
            ||:|...::|||||||||..|:|.|:|
Mouse   532 VVNEADSIVGIISLSDILQALILTPAG 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 89/128 (70%)
CBS 952..1067 CDD:223591 79/115 (69%)
CBS 1023..1141 CDD:223591 74/117 (63%)
CBS_pair_28 1097..1215 CDD:240012 75/117 (64%)
CBS 1097..1213 CDD:223591 73/115 (63%)
Prkag2XP_006535674.1 CBS_euAMPK_gamma-like_repeat1 267..404 CDD:341388 95/136 (70%)
CBS repeat 275..348 CDD:341388 53/72 (74%)
CBS repeat 360..404 CDD:341388 31/43 (72%)
CBS_euAMPK_gamma-like_repeat2 430..553 CDD:341399 77/122 (63%)
CBS repeat 431..496 CDD:341399 40/64 (63%)
CBS repeat 507..550 CDD:341399 28/42 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8741
eggNOG 1 0.900 - - E1_COG0517
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 1 1.000 - - otm42542
orthoMCL 1 0.900 - - OOG6_101734
Panther 1 1.100 - - O PTHR13780
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4230
SonicParanoid 1 1.000 - - X716
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.800

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