DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNF4Agamma and kmt2d

DIOPT Version :9

Sequence 1:NP_001163671.1 Gene:SNF4Agamma / 42515 FlyBaseID:FBgn0264357 Length:1400 Species:Drosophila melanogaster
Sequence 2:XP_017947166.2 Gene:kmt2d / 100494109 XenbaseID:XB-GENE-855725 Length:6132 Species:Xenopus tropicalis


Alignment Length:1392 Identity:278/1392 - (19%)
Similarity:429/1392 - (30%) Gaps:409/1392 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PVKQQP-LANAPVMGVQEDKAQEPK---------------ELP----------DEPAKQPDGQPY 49
            |..|.| |::..|:....|...:|.               :||          ..||...|.: |
 Frog  1564 PTAQDPFLSSGSVLSTSSDLFLKPSPAGTPGVESPGDVFFKLPPPSPSQEHMNSSPAYSLDPR-Y 1627

  Fly    50 QHFAGEDSFECAFESTMDDLEQGV----------LDGYESDSEASANDQ-------ITDSASSGS 97
            |...|:....|....||...|...          || |:|..:|:.:.|       |.....:||
 Frog  1628 QSSLGQSPVSCGSFQTMSGTENHPGPNAQQATHNLD-YQSSHQATTHHQPLTPEPFIKPRYPAGS 1691

  Fly    98 LGQLAQQQQREERLRGLPGPLHGQHIDSEMLKCMPRSNSFDFHSSSGSSSDDED--DPDDDDDDQ 160
            |..|:        |.|.|||...|                   ||..||...|.  .|....|.:
 Frog  1692 LDNLS--------LIGSPGPRLSQ-------------------SSENSSKPGEPMMSPSRYGDPK 1729

  Fly   161 VHHSLGLSLSGKFVKVDLYSGHQRPGYLLPPYIERRRLSQCKEEDDEDEGDRTQLGGGSSSTGES 225
             .||.|:                              |.|.|:||....|....:|   |:.|.:
 Frog  1730 -RHSDGM------------------------------LYQVKKEDVGSPGYPHSVG---SADGTA 1760

  Fly   226 TKSEKASKAPPRPPT----PQDEASKEKFKDLERLRQQFMHKIDRINTRNIEESEAPPPPPPPPP 286
            .......|||..|.|    |...||..:...|........|..|.....:...|...|...||..
 Frog  1761 EMKFDVFKAPLTPRTSQIEPHSPASSHRDPHLYAQVTSPQHHSDMYRQSSSSVSYTDPYSQPPLT 1825

  Fly   287 PIP------ATILPKALKALLHTQEPVAPPSRPSPVGPPSPAPTSSVIVAKETPVPVTPEPVSPL 345
            |.|      .|:.|:::.:...|:.|.:|.|:.|...|.:|.|.|:....:.   ||||...||.
 Frog  1826 PRPQSSEGSCTLNPRSISSDSFTRVPTSPQSQASSQSPLTPRPLSAEAFCQS---PVTPRFQSPD 1887

  Fly   346 PLPTEPPL--IIKGKFKVTLAQETPELRVEAQKLSKLNASSNAHTISFPSSFGGYSSV------- 401
            |. ::||.  ..:..|..:.....|::..:..|.|    |...||....||:.....|       
 Frog  1888 PY-SQPPSRPHSRDPFAPSHKPNRPQVTEQGFKPS----SQLLHTSPVGSSYQSSQEVHPKVPVN 1947

  Fly   402 ---QGLFSQRYGSNRFPTAA-------PH------MSKQFFEPSLVEIRTPAQSNVALNT----- 445
               ..:||:..|::.||.|.       ||      .|....:|:|       .|:.::||     
 Frog  1948 QQQNSMFSRSPGASVFPNAQNQLCFTFPHSPGDSVKSSPSHQPNL-------PSSHSMNTFHPNK 2005

  Fly   446 ---TGLANSNHQSLTCDTNSLANKPRTPSERELDEIWIRRQDGGLSGTAAPGAPGAPLPLLQQQQ 507
               ....|||..|.     ..||.|.:.......:::.:             :|..|..:|.|:|
 Frog  2006 PQSYASPNSNTPSF-----HAANSPHSSGNSSTSDVYAQ-------------SPHRPPSVLPQEQ 2052

  Fly   508 QQQRPVSLGGASTMPRLLRSESSASTTSPSRQLTNSGSVSVSVSDDEQDGSLGGAGRMPGSRPSS 572
            ..|.|                       ..||..||.:       ::|...|.|.....|:.|..
 Frog  2053 TFQSP-----------------------SQRQGLNSPA-------EKQREDLSGTANALGTTPKE 2087

  Fly   573 AP---AEPNAKAAKKAYKKMEKEQRRQEKEQSRREKEARKLERETARRNEREAAKLEKINRH--- 631
            .|   :.|:...:..:..::|:.::||.    .||...|:..:....|.|:|||.....:.|   
 Frog  2088 GPELQSTPDPALSNMSQTELERHRQRQR----LRELLIRQQMQRNTLRQEKEAAAATLSSSHPGW 2148

  Fly   632 -SEKISRSTERMAMAGV---GSRSGSLE--------RRRSGEDSPVLNQSTVHGIASPNRRP-TI 683
             :|...:|.:.:...|:   .....||.        .:.|.:..|   |.....:..||..| |:
 Frog  2149 SAELSGQSFDTVGRVGIYPSAQEKASLSVIPASPGTSKPSAQSFP---QDDRLNMPLPNASPGTV 2210

  Fly   684 FDVFRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGA------GGAAAAA 742
            .:..|...::...........|.:....|..:|..||:......|.|...|.      .|....:
 Frog  2211 DNSGRQSVETTQTFYARGPFPDQAQVWQSPVASQRSVTPNRPSLTPSLTSGGIVRFPFPGDQITS 2275

  Fly   743 GQGAAGGAGGLMNSMKVAMQNFSHRQH-PAVTI-TSADGTQSTAKSKYKDGSAHPHQGSDAQYYH 805
            .....|||           .....|.| |.:.| |:.....|..:.::...|    :|.:.....
 Frog  2276 SSVTVGGA-----------PYIELRHHAPKLPIGTTFSPPVSQTRPRFYLAS----EGGNPPLIP 2325

  Fly   806 TVTAVRPNSSQ----RSPMTKVMDL-----FRHRSSSVVSEADKRKARAAA------HQQQLAVQ 855
            .|.....|..|    |:|:.:|...     ..|.::.:|.......|:..|      ||..|...
 Frog  2326 GVVRTDGNPIQMPVMRNPLLQVQKSLTSTPLTHHATHMVGVQQPLHAKVEAIPEITQHQSNLQTP 2390

  Fly   856 SAHMRRASADLEKRRASVGAAGRGLRGDGTLDPHHAAILFRDSR----------GLPVADPFLEK 910
            :.    |.::..|...|.|..|..:..|   ||....:.|...:          .|.||....:.
 Frog  2391 AP----ALSEGAKEGTSAGVEGGRVHCD---DPPELDVDFDTHKDLEDDDLANLSLDVAKADDDL 2448

  Fly   911 VNLSDLEEDDSQIFVKFFRFHKCYDLIPTSAKLVVFDTQLLVKKAFYALVYNGVRAAPLWDSEKQ 975
            .||.:||.:|..:                        ..||....|..|.|.        |.|  
 Frog  2449 GNLDNLETNDPHL------------------------DDLLNGDEFDLLAYT--------DPE-- 2479

  Fly   976 QFVGMLTITDFIKILQMYYKSPNASMEQLEEHKLDTWRSVLHNQVMPLVSIGPDASLYDAIKILI 1040
                 |...|...|...:.:...::.|:.||.              .|:.:.||:|  ||....:
 Frog  2480 -----LDTGDKKDIFNEHLRLVESANEKAEEE--------------ALMKMEPDSS--DAKTDCL 2523

  Fly  1041 HSRIHRLPVIDPATGNVLYILTHKRILRFLFLYINELP-----KPAYMQKSLRELKIGTYNNIET 1100
            ..:|.:     ..:.|.:...|..::...|.|   |||     |.|.: .|..|.|.....|.:.
 Frog  2524 PKKIQQ-----EVSVNAIVETTKDKLTGDLGL---ELPHSGGGKVAQI-PSTAETKPAFSGNFKP 2579

  Fly  1101 ADETTSIITALKKFVERRVSALPLVDSDGRLVDIYAKFDVINLAAEK-------TYNDLDVSLRK 1158
            ..|                        ||.:.....:|...|..:.|       ..|.|.:.|.|
 Frog  2580 KTE------------------------DGGMKSSNCQFSTSNQVSVKIEPSHGNDKNVLGIGLVK 2620

  Fly  1159 ANEHRNEWFEGVQKCNLDESLYTIMERIVRAEVHRLVVVDENRKVIGIISLSDILLYL--VLRPS 1221
            :....|  ....|..|....:::..:         ..|..::..::|...|.|..|.|  ..:..
 Frog  2621 SGTAHN--VNPTQATNQGAPVFSNQD---------TAVAGQSSLILGNFELDDGALGLQGARQSP 2674

  Fly  1222 GEGVGGSESSLRASD-PVLLRKVAEVE 1247
            .:.:...||||.||: |:|:..:.|.|
 Frog  2675 SDDLDKMESSLVASELPLLIEDLLEHE 2701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNF4AgammaNP_001163671.1 CBS_pair_5 941..1069 CDD:239990 22/127 (17%)
CBS 952..1067 CDD:223591 20/114 (18%)
CBS 1023..1141 CDD:223591 24/122 (20%)
CBS_pair_28 1097..1215 CDD:240012 18/124 (15%)
CBS 1097..1213 CDD:223591 18/122 (15%)
kmt2dXP_017947166.2 ePHD1_KMT2D 126..209 CDD:277165
PHD1_KMT2C_like 220..265 CDD:276984
PHD2_KMT2D 267..312 CDD:277070
PHD3_KMT2D 808..858 CDD:277072
PHD5_KMT2C_like 859..905 CDD:276988
PHD5_KMT2D 936..986 CDD:277074
HMG 1461..1512 CDD:197700
PHA03307 1745..>2115 CDD:223039 92/435 (21%)
PHA03307 1975..>2261 CDD:223039 65/347 (19%)
Med15 3053..>3382 CDD:312941
ePHD2_KMT2D 5627..5733 CDD:277168
FYRN 5776..5818 CDD:399155
FYRC 5833..5917 CDD:399156
SET_KMT2C_2D 5979..6131 CDD:380948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8683
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000896
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X716
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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