Protein Alignment Snmp1 and scav-1

DIOPT Version :10

• Sequence 1: NP_650953.1
• Gene: Snmp1 / 42514
• FlyBaseID: FBgn0260004
• Length: 551
• Species: Drosophila melanogaster
• Sequence 2: NP_508919.2
• Gene: scav-1 / 180812
• WormBaseID: WBGene00015389
• Length: 563
• Species: Caenorhabditis elegans
• Alignment Length: 571
• Identity: 125/571 - (21%)
• Similarity: 218/571 - (38%)
• Gaps: 120/571 - (21%)

  Fly     9 LMGSGAMFVFAIIYGWVIFPKILKFMISKQVTLKPGSD-----VRELWSNTPFPLHFYIYVFNVT 68
            |:|: |:.|..::....:||.|:...|:....|...:|     ..:.|.|:.:......:|::.|
 Worm    17 LIGA-ALLVAGLVIVLNVFPNIVNNQINDSKVLGLNADGTLNSFTDSWVNSKYISTMQYWVYDYT 80

  Fly    69 NPDEVSEGA-KPRLQEVGPFVFDE--WKDKYDLEDDVVEDTVSFTMRNTFIFNPKESLPLTG--- 127
            |...:...| .|.::|.||:.|||  ..||.:..::  .:.:.|....||:|||.:|  ..|
 Worm    81 NTIGIMNRAIYPDVREKGPYAFDEILTMDKLNFSEN--GEFMEFRQIQTFVFNPNKS--CAGCDP 141

  Fly   128 -EEEIILPHPIMLPG---------GISVQREKAAMMELVSKGLSIVFPDAK-------AFLKAK- 174
             ::::::|......|         ||......|.:...:.||.    |:|.       |.::.:
 Worm   142 YKDKVLIPDMGFQVGIDQIDTVIEGILKNPLAATICHAIMKGK----PNANQTCSNLGALIEGEL 202

  Fly   175 --FMDLF----FRGINVDCSSEEFSAKALCTVFYTGEIKQAKQVNQTHFLFS------------- 220
              .:.||    |..:.||    :.......|.|....:.:|  :...||||.
 Worm   203 GTLISLFNVSPFTTVTVD----QLLFSGYKTPFVEKFLDEA--LGMLHFLFGTAPKPLDDPPIQL 261

  Fly   221 -------------FMGQANHSDSGRFTVCRGVKNN---KKLGKVV----------KFADEPEQDI 259
                         ..|:.:...:|..|..|.:.||   ..:|..:          .:..:|...:
 Worm   262 NPLNGTSDIINTVLTGKTDPLKAGYMTEFRSISNNSLFNSIGNTLPPMWWPYANKTYCKDPNSAL 326

  Fly   260 WPDGECNTFVGTDSTVFAPGLKKEDGLWAFTPDLCRSLGAYYQHKSSYHGMPSMRYTL--DLGDI 322
                   ...||:...|...:||.|.|.||..|:||::...:..:.:..|....|:.:  ...|.
 Worm   327 -------VLTGTNGDYFKNFVKKTDILPAFVSDVCRTIHFVFDREVTVKGFKGYRFVMPPTQFDY 384

  Fly   323 RADEKLHC-FC--------EDPEDLDTCPPKGTMNLAACVGGPLMASMPHFYLGDPKLVADVDGL 378
            ..||  :| :|        |.|.. ..|.|.|.::::.|.|||::.|.||||.....:...|...
 Worm   385 SLDE--NCGYCIPLKYGSYEYPAQ-SACLPSGLLDISQCTGGPIIMSKPHFYQASKVVSKFVPRF 446

  Fly   379 NPNEKDHAVYIDFELMSGTPFQAAKRLQFNLDMEPVEGIEPMKNLPKLILPMFWVEEGVQLNKTY 443
            .|...:....:|.|..:||..||.||||.|:.:...:.|.....:.....|:.||.|...:::..
 Worm   447 KPTYDNDETMLDIEPNTGTVLQAQKRLQINMLVNQFKHIRSYSVMRPGAYPLAWVNESFYMDQNT 511

  Fly   444 TNLVKYTLFLGLKINSVLRW-------SLITFSLVGLMFSAYLF---YHKS 484
            .:.:...||..:...:.:.|       .||..|:|.::.|...|   :||:
 Worm   512 IDQLNSQLFTPVSTVNTICWIAVGLGAGLIALSIVMVIVSFCCFRDEHHKT 562

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snmp1	NP_650953.1	CD36	11..480	CDD:460076	121/560 (22%)
scav-1	NP_508919.2	CD36	17..548	CDD:460076	121/555 (22%)