Protein Alignment Snmp1 and scav-2

DIOPT Version :10

• Sequence 1: NP_650953.1
• Gene: Snmp1 / 42514
• FlyBaseID: FBgn0260004
• Length: 551
• Species: Drosophila melanogaster
• Sequence 2: NP_499802.3
• Gene: scav-2 / 176787
• WormBaseID: WBGene00013578
• Length: 558
• Species: Caenorhabditis elegans
• Alignment Length: 541
• Identity: 140/541 - (25%)
• Similarity: 244/541 - (45%)
• Gaps: 67/541 - (12%)

  Fly     8 LLMGSGAMFVF-AIIYGWVIFPKILKFMISKQVTLKPGSDVRELWSNTPFPLHFYIYVFNVTNPD 71
            :|:|.|:..:| ::|...|:.||::|..|.:...|..||.:.|.|:...:.:.|.:||::..|||
 Worm    39 VLIGLGSFLLFGSLITHTVVVPKVVKSSIEENSRLVNGSIMWEKWAMPEYKIRFNMYVYSTKNPD 103

  Fly    72 EVSEGAKPRLQEVGPFVFDEWKDKYDLEDDVV---EDTVSFTMRNTFIFNPKESLPLTGEEEIIL 133
            |...||.|.:...||:|||:     .:|:.||   ..||.:....|:.||.:||.     :..||
 Worm   104 EFMNGAIPEVTGSGPYVFDK-----KMENRVVSAENGTVKYRRFFTYNFNEQESC-----QTCIL 158

  Fly   134 PHPIMLPGGI--------SVQREKAAMMELVSKGLSIVFPDAKAFLKAKFMDLFFRGINVDCSSE 190
            .:.|.:|..|        |.:..|||...|:|:         .|||:.:..:|.|.|.     .:
 Worm   159 GNRIWVPNMIYQKFVEAASTEGMKAAATTLLSQ---------TAFLEVEVEELLFEGY-----KD 209

  Fly   191 EFSAKALCTVFYTGEIKQA-KQVNQTHFLFSFMGQANHSDSGRFTVCRGVKNNKKLGKVVKFADE 254
            .|..| :|.:.:...:.:| ..|.:...||.   :||.:.|..:.:..|.:|...|||::.:.:.
 Worm   210 PFLDK-VCEIPFMNFVCEAILDVPERIGLFF---KANGTGSKVYEIDDGTRNPDDLGKILSYDES 270

  Fly   255 P--EQDIWPDGECNTFVGTDSTVFAPGLKKEDGLWAFTPDLCRSLGAYYQHKSSYHGMPSMRYTL 317
            |  ::..|...|.....|||.::|.|.|.|.:.|:.:..:||||:...::.:..|.|:.:.|:.:
 Worm   271 PILDETWWSTDESLKIKGTDGSLFHPFLSKHEKLYVYVAELCRSIWLEFKEEVEYRGLKAYRFVV 335

  Fly   318 -----------DLGDIRADEKLHCFCEDPEDLDTCPPKGTMNLAACVGG--PLMASMPHFYLGDP 369
                       :.|.....||.  |.|...|...|.|||.:.::.|...  |:..|:|:|.....
 Worm   336 PPEVFDVTHPGNQGFCNPSEKQ--FYESQNDSSNCMPKGLLEISKCQQSQPPITISLPNFLFAPS 398

  Fly   370 KLVADVDGLN-PNEKDHAVYIDFELMSGTPFQAAKRLQFNLDMEPVEGIEPMKNLPKL---ILPM 430
            ::...|.||| .:|...::.:|.|...|....|.:..|.|::|...:.:....||.|:   ::|:
 Worm   399 EVRGSVKGLNETDEIRDSIVVDIEPRVGAVLYARRVSQVNIEMWKGKNLTFPVNLKKMKSALIPV 463

  Fly   431 FWVEEGVQLNKTYTNLVKYTLFLGLKINSVLRWSLITFSLVGLMFSAYLFYHKSDSLDI-NSILK 494
            ..:.|..:::......::..|:   :..|:...|.....::|.:.....|...|.||.: :.||.
 Worm   464 LILHETSEIDDDSLEQIRSQLY---ETESIAYTSCDVMMIIGAIMLLLGFLFLSFSLGLCDPILG 525

  Fly   495 DNNKVDDVASTKEPLPSANPK 515
            ..:|..:..| .||||...||
 Worm   526 RRSKRANGLS-PEPLPPYVPK 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snmp1	NP_650953.1	CD36	11..480	CDD:460076	125/500 (25%)
scav-2	NP_499802.3	CD36	42..505	CDD:460076	125/495 (25%)