DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snmp1 and emp

DIOPT Version :10

Sequence 1:NP_650953.1 Gene:Snmp1 / 42514 FlyBaseID:FBgn0260004 Length:551 Species:Drosophila melanogaster
Sequence 2:XP_314346.4 Gene:emp / 1275121 VectorBaseID:AGAMI1_005870 Length:522 Species:Anopheles gambiae


Alignment Length:539 Identity:140/539 - (25%)
Similarity:228/539 - (42%) Gaps:89/539 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LMGSGAMFVFAIIYGWVIFPKILKFMISKQVTLKPGSDVRELWSNTPFPLHFYIYVFNVTNPDE- 72
            |:..||:..|.       |...::.:|..||.|:.|......||..|......|:|:||||.|| 
Mosquito    30 LLVLGALVTFG-------FTAFIRTIIDHQVALRVGGQSFGWWSRPPVEPIIRIFVYNVTNADEF 87

  Fly    73 VSEGAKPRLQEVGPFVFDEWKDKYDLEDDVVEDTVSFTMRNTFIFNPKESLPLTGEEEIILPHPI 137
            ::.|.||.|.|:||:|:.:..:|.::::: ...|:|:..:..:|||  |.|....|:::::...|
Mosquito    88 LNNGTKPILDELGPYVYVQTWEKVNIKEN-PNGTISYNQKRVYIFN--EDLSGGLEDDVVIVPNI 149

  Fly   138 MLPGGISVQREKAAMMELVSKGLSIVFPDAKAFLKAK-FMDLFFRGINVDCSSEEFSAKALCTVF 201
            .:....|..:..|..:.|....:..:       ||.| |:              |.|...|...:
Mosquito   150 PMLSATSQSKHAARFLRLAMASIMDI-------LKIKPFV--------------EVSVGQLLWGY 193

  Fly   202 YTGEIKQAKQV-----NQTHFLFSFMGQANHSDSGRFTVCRGVKNNKKLGKVVKFADEPEQDIWP 261
            ....:|.||.|     ...:..|..|...|.:.....||..||.:..:.|.:.|:.....|..|.
Mosquito   194 EDPLLKLAKDVVPKEQKLPYEEFGLMYGKNSTSKDTVTVWTGVDDITQYGIIDKYNGRSHQTHWL 258

  Fly   262 DGECNTFVGTDSTVFAPGLKKEDGLWAFTPDLCRSLGAYYQHKSSYH-GMPSMRYTLD---LGDI 322
            ..:||...|||.::|.|.:.|...|..:..||||.|...::.:.:.. |:...|:|..   ...:
Mosquito   259 SEQCNRLNGTDGSIFPPRITKNSTLHVYEKDLCRLLPLSFEKEVTVRGGVKGYRFTPSPDVFASV 323

  Fly   323 RADEKLHCFCEDPEDLDTCPPKGTMNLAAC-VGGPLMASMPHFYLGDPKLVADVDGLNPNEKD-H 385
            ..:....|:|  |.. ..|.|.|..|::.| ...|::.|.||||:.|..|...|:|::|.||| |
Mosquito   324 DKNPNNMCYC--PAG-PPCAPHGLFNVSLCQYDSPILLSFPHFYMADQTLRTAVEGISPPEKDKH 385

  Fly   386 AVYIDFELMSGTPFQAAKRLQFNLDMEPVEGIEPMKNLPKLILPMFWVEEGV--------QLNKT 442
            .::||.:...||..:|..|:|.||.:..|..|:.:.|.|.::.|:.|.|||:        .|.|.
Mosquito   386 QLFIDVQPDMGTALRARARIQINLAVSQVVDIKQVANFPDIVFPILWFEEGIDSLPDEILDLMKV 450

  Fly   443 YTNLVKYTLFLGLKINSVLRWSLITFSLVGLMFSAYLFY----------HKSDSLDINSI----- 492
            .||:.....|            ::|.:|.||  ..:||.          |:..:|.:...     
Mosquito   451 ATNIPPRAKF------------ILTIALFGL--GGFLFVVAVICLVRKSHRQSTLHLEGSNYLAT 501

  Fly   493 -----LKDNNKVDDVASTK 506
                 .|...|:|:..|:|
Mosquito   502 ASVDQAKKKAKMDNGMSSK 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snmp1NP_650953.1 CD36 11..480 CDD:460076 130/489 (27%)
empXP_314346.4 CD36 24..481 CDD:460076 133/498 (27%)

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