DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5810 and cDIP

DIOPT Version :9

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster


Alignment Length:439 Identity:121/439 - (27%)
Similarity:194/439 - (44%) Gaps:57/439 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NYILIAVIAFAT--------CESQKLEEIAIDSLD--C----RENTCTNLKYPSASAVAYF---- 54
            :|:||::.|.||        .:|.....:.:.||:  |    :..:|...::......|.|    
  Fly    12 SYLLISLAATATTDEDADADVDSGSSRIVLVSSLEGHCQTEGKVTSCRGFEFAGEDEKATFDLPT 76

  Fly    55 ----SENVT-------KHLRKYETLVLHSSDLANLPRKIFLNLPQLVEFHVLECELQQIESVCFD 108
                :|:.|       :|.|   ||:..:....|.|.::|..| ::.|..:..|.::.|....|.
  Fly    77 EVRIAEDGTTYEVGDEEHSR---TLIFENCTFTNFPLRLFYTL-EVSELDMRGCGIRFIYWENFS 137

  Fly   109 -GAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSDNQLEDLPTTIFRPLKNLQKINLSNNRLI 172
             ||..|..|....|.:.||.:.||..|..||.:.|:.|:|..|....|..|..||.::|:.|||.
  Fly   138 IGADKLVILLLSDNHIEVLPTKTFRGAGNLEFIFLNRNKLGKLQAGAFDNLLKLQYLDLTENRLE 202

  Fly   173 TLSQHIFSQLGSLKSINVDSNQLVELPGELFRDQRKHLSEFSAQSNQLVRIPFNIFR------EI 231
            .|:..:|:.|.||:.:.:..|||..:..:||......|| .:.|:|:|..:....||      ::
  Fly   203 ALAADVFAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLS-VAMQNNRLREVGEYAFRSRGRHHQM 266

  Fly   232 DHLSLSFNPQLRRLHLSAKINELEATNCDLESVELDGRVIGVQLEANPKLHELKISQPQDLEHLY 296
            .::.||.||:|..|.|:.....|.|.||.|:.|.|.|.|..|.|..| ::.||.....:.||||.
  Fly   267 QYVDLSNNPELVVLLLNINATNLTARNCSLDRVNLYGSVTNVDLSDN-RVRELYFPASEALEHLV 330

  Fly   297 LANTNLYRLDFLSKASKLVDLDVTDIVNLADLPKITSAKGLERLSFTYDNLTSNHMDMLPHLKDL 361
            |.|.:|.:|..||:..:|..|||.|..||..||.......||.|...........::.|..:::|
  Fly   331 LRNNSLVQLASLSRVPRLRHLDVADNPNLGQLPDGWRTPHLEMLVLRNTGQMELPLEALQGMQNL 395

  Fly   362 NYLEISHEKGKEIFIKDLDED----------FFVEEAELNCGQLADLLE 400
            ..|:||...     :.::|..          |::.....||..|.::::
  Fly   396 QKLDISGNN-----LTEIDPSAFPTLTQLTHFYIHGNNWNCFSLRNIMD 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 leucine-rich repeat 65..88 CDD:275380 6/22 (27%)
LRR_8 87..147 CDD:290566 18/60 (30%)
leucine-rich repeat 89..112 CDD:275380 6/23 (26%)
leucine-rich repeat 113..136 CDD:275380 8/22 (36%)
LRR_8 135..195 CDD:290566 20/59 (34%)
LRR_4 135..175 CDD:289563 14/39 (36%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..209 CDD:275380 6/23 (26%)
leucine-rich repeat 210..231 CDD:275380 7/26 (27%)
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 6/23 (26%)
LRR_RI 143..407 CDD:238064 87/270 (32%)
leucine-rich repeat 143..166 CDD:275380 8/22 (36%)
LRR_8 166..225 CDD:290566 20/58 (34%)
leucine-rich repeat 167..190 CDD:275380 8/22 (36%)
leucine-rich repeat 191..214 CDD:275380 9/22 (41%)
leucine-rich repeat 215..238 CDD:275380 6/22 (27%)
leucine-rich repeat 239..265 CDD:275380 7/26 (27%)
leucine-rich repeat 266..325 CDD:275380 21/59 (36%)
LRR_8 304..357 CDD:290566 21/53 (40%)
leucine-rich repeat 326..347 CDD:275380 10/20 (50%)
leucine-rich repeat 348..394 CDD:275380 13/45 (29%)
LRR_8 369..428 CDD:290566 10/63 (16%)
LRR_4 393..433 CDD:289563 8/44 (18%)
leucine-rich repeat 395..418 CDD:275380 5/27 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453651
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3CB3K
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007563
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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