DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5810 and Con

DIOPT Version :9

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001246635.1 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster


Alignment Length:378 Identity:92/378 - (24%)
Similarity:160/378 - (42%) Gaps:82/378 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KHLRKYETLVLHSSDLANLPRKIFLNLPQLVEFHVLECELQQIESVCFDGAKNLKRLNFGGNALR 124
            |.||:.:.::.:::.|..:|..|...|..|....:...:::.::|..|.....|:|:....|.:.
  Fly   156 KRLRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIM 220

  Fly   125 VLDSNTFELATQLEELNLSDNQLEDLPTTIFRPLKNLQKINLSNNRLITLSQHIFSQLGSLKSIN 189
            .||.:.|....:|.||||..||:.::....||.|...:::.|:||.:.||.:.:|:.:..|..:|
  Fly   221 ALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLN 285

  Fly   190 VDSNQLVELPGELFRDQRKHLSEFSAQSNQLVRIPFNIFREIDHLSLSFNPQLRRLHLSAKINEL 254
            :..||:..|..|:||. ..:|:......|.|..|...:|.|:..||                 ||
  Fly   286 LAHNQINVLTSEIFRG-LGNLNVLKLTRNNLNFIGDTVFAELWSLS-----------------EL 332

  Fly   255 EATNCDLESVE---LDGRVIGVQLEANPKLHELKISQPQDLEHLYLANTNLYRLD--FLSKASKL 314
            |..:..:|.:.   |||            |:.||.        |.|.|..|.::|  .|.....|
  Fly   333 ELDDNRIERISERALDG------------LNTLKT--------LNLRNNLLKKIDNGLLRGTPAL 377

  Fly   315 VDLDVTDIVNLADLPKITSAKGLERLSF-TY----DNLTSNHMDMLPHLKDLNYL---------E 365
            :.::|             .|..||.|:| |:    |||.::..::|  :.|..::         |
  Fly   378 LSINV-------------QANKLETLTFYTFQPIMDNLVNSTSELL--VSDNKFICDCRLQWIFE 427

  Fly   366 ISHEKGKEIFIKDLDEDFFVEEAELNCG-QLADLLEFVELPKDTTILEDRLVG 417
            :.: :.:.:.::|..||       |:|. |...|..||: |...|||:...:|
  Fly   428 LKN-RTRHLQLRDSLED-------LHCTLQEPKLSHFVD-PVPPTILDVLNIG 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 leucine-rich repeat 65..88 CDD:275380 4/22 (18%)
LRR_8 87..147 CDD:290566 15/59 (25%)
leucine-rich repeat 89..112 CDD:275380 3/22 (14%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
LRR_8 135..195 CDD:290566 19/59 (32%)
LRR_4 135..175 CDD:289563 14/39 (36%)
leucine-rich repeat 137..160 CDD:275380 10/22 (45%)
leucine-rich repeat 161..184 CDD:275380 6/22 (27%)
leucine-rich repeat 185..209 CDD:275380 8/23 (35%)
leucine-rich repeat 210..231 CDD:275380 5/20 (25%)
ConNP_001246635.1 LRR_RI <147..291 CDD:238064 35/134 (26%)
LRR_8 183..243 CDD:290566 15/59 (25%)
leucine-rich repeat 185..208 CDD:275380 3/22 (14%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
LRR_RI <225..416 CDD:238064 62/243 (26%)
LRR_8 232..291 CDD:290566 19/58 (33%)
leucine-rich repeat 233..256 CDD:275380 10/22 (45%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
leucine-rich repeat 281..304 CDD:275380 8/23 (35%)
LRR_8 304..363 CDD:290566 21/95 (22%)
leucine-rich repeat 305..328 CDD:275380 6/22 (27%)
leucine-rich repeat 329..352 CDD:275380 10/51 (20%)
LRR_8 352..416 CDD:290566 21/86 (24%)
leucine-rich repeat 353..376 CDD:275380 8/30 (27%)
LRRCT 414..>450 CDD:214507 6/43 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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