DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5810 and CG5819

DIOPT Version :10

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_611660.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:448 Identity:104/448 - (23%)
Similarity:182/448 - (40%) Gaps:129/448 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRMLNYLNYILIAVIA--------------------FATCESQKLEE------IAIDSLDCRENT 39
            ||::..|..:::.||:                    :|.|..:.|:.      |.::.||...|.
  Fly     1 MRIVLELALLVLGVISSCRAVNCPWPCRCTWVVDSLYADCSRRSLQTYPNFDGIPVEHLDLSGNK 65

  Fly    40 CTNLKYPSASAVAYFSENVTKHLRKYETLV---LHSSDLANLPRKIFLNLPQLVEFHVLECELQQ 101
            .  |::|:..|             ..::|:   |.|:.::::..|..:....|....:....:..
  Fly    66 F--LEFPTLYA-------------DIDSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDS 115

  Fly   102 IESV----CFDGAKNLKRLNFGGNALRVL-DSNTFELAT--QLEELNLS---------DNQLEDL 150
            .||:    .|..|.:||||...||.|... :..:|||.|  .|.:|.||         |..:..|
  Fly   116 WESLSPNEAFKYAPSLKRLGLDGNRLGSFGNGESFELLTSSSLTDLGLSSCGISSIGGDQMVNQL 180

  Fly   151 PTTIFRPLKNLQKINLSNNRLITLSQHIFSQLGSLKS-----INVDSNQLVELPGELFRDQRKHL 210
            |        ||:::||:||:|        :|:.:|.|     :::.:..:..|.| .|.|..::|
  Fly   181 P--------NLERLNLANNQL--------AQIAALPSRTLRVLDLSNCSIKNLSG-FFLDAMQNL 228

  Fly   211 SEFSAQSNQLVRIPFNIFREIDHLSLSFNPQLRRLHLSAKINELEATNCDLESVELDG------- 268
            ...:...|          .|:...|||.:|.|..:     :.:|:.:.|:|:|:||.|       
  Fly   229 EALNLSRN----------TELQFDSLSEDPILTYM-----LRKLDVSYCNLDSIELSGLPQLTEV 278

  Fly   269 -------RVIGVQLEANPKLHE-LKISQ------PQD-------LEHLYLANTNLYRLD--FLSK 310
                   ||:.|...||..:.| :.:||      .||       |:.|.||...:.|||  |:..
  Fly   279 RLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRHIGQDAFAKLKRLKELNLAFNEIARLDRNFIRN 343

  Fly   311 ASKLVDLDVTDIVNLADLPKITSAKGLERLSFTYDNLTSNHMDMLPHLKDLNYLEISH 368
            ...||:|:::..| |..|.||.| ..:..::.::..:||.....|..|..:..|::|:
  Fly   344 NDVLVELNLSRNV-LQKLTKIVS-NSVRTINMSWCEITSIESTALSSLSVIQKLDLSN 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 LRR <61..353 CDD:443914 85/345 (25%)
leucine-rich repeat 65..88 CDD:275380 4/25 (16%)
leucine-rich repeat 89..112 CDD:275380 5/26 (19%)
leucine-rich repeat 113..136 CDD:275380 11/25 (44%)
leucine-rich repeat 137..160 CDD:275380 7/31 (23%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..209 CDD:275380 6/28 (21%)
leucine-rich repeat 210..231 CDD:275380 2/20 (10%)
CG5819NP_611660.1 RNA1 <56..193 CDD:444072 39/159 (25%)
leucine-rich repeat 56..78 CDD:275380 6/36 (17%)
leucine-rich repeat 79..102 CDD:275380 4/22 (18%)
leucine-rich repeat 103..130 CDD:275380 5/26 (19%)
leucine-rich repeat 131..155 CDD:275380 10/23 (43%)
LRR 134..>466 CDD:443914 77/300 (26%)
leucine-rich repeat 158..182 CDD:275380 7/31 (23%)
leucine-rich repeat 204..227 CDD:275380 4/23 (17%)
leucine-rich repeat 254..274 CDD:275380 7/19 (37%)
leucine-rich repeat 275..298 CDD:275380 5/22 (23%)
leucine-rich repeat 299..322 CDD:275380 5/22 (23%)
leucine-rich repeat 323..346 CDD:275380 8/22 (36%)
leucine-rich repeat 347..391 CDD:275380 13/45 (29%)
leucine-rich repeat 392..413 CDD:275380 2/8 (25%)
leucine-rich repeat 414..437 CDD:275380
LRRCT 471..517 CDD:214507
Blue background indicates that the domain is not in the aligned region.

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