DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5810 and CG14762

DIOPT Version :9

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster


Alignment Length:324 Identity:88/324 - (27%)
Similarity:139/324 - (42%) Gaps:64/324 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MLNYLNYILIAVI---AFATCESQKLEEIAIDSLDCRENTCTNLKYPSASAVAYFSENVTKHLRK 64
            :|| ||:..|.||   ||...|:       ::.|...||..|.:. |.|      ...:..|:::
  Fly   157 ILN-LNHNKITVIHNNAFEGLET-------LEILTLYENKITQID-PEA------FRGLEDHIKR 206

  Fly    65 YETLVLHSSDLANLPRKIFLNLPQLVEFHVLECELQQIESVCFDGAKN----------------- 112
               |.|..:||.|:|:|....|..|.:..:.|.:::.|....|:|.::                 
  Fly   207 ---LNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPAN 268

  Fly   113 -------LKRLNFGGNALRVLDSNTFE-LATQLEELNLSDNQLEDLPTTIFRPLKNLQKINLSNN 169
                   |..|...||.:.|:|.:.|: |...|:.|.|.|||:..:|:...|||..|:.::|.||
  Fly   269 VFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNN 333

  Fly   170 RLITLSQHIFSQLG-SLKSINVDSNQLVELPGELFRDQRKHLSEFSAQSNQLVRIPFNIFRE-ID 232
            .:..|::..|:..| ||..:|:..|.:..||..|| :....|...:.|:|:|.|||.:|... ||
  Fly   334 NINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLF-ENLNSLETLNLQNNKLQRIPQDIMEPVID 397

  Fly   233 HL--------------SLSFNPQLRRLHLSAKINELEATNCDLESVELDGRVIGVQLEANPKLH 282
            .|              .|::.|:|.. .|..|.:|:......|..:.||.|...||.....|:|
  Fly   398 TLRIIDITDNPLNCSCELTWFPKLLE-DLKNKDDEMSQKKKPLCHMSLDNREYFVQAMPTEKMH 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 leucine-rich repeat 65..88 CDD:275380 8/22 (36%)
LRR_8 87..147 CDD:290566 18/84 (21%)
leucine-rich repeat 89..112 CDD:275380 5/22 (23%)
leucine-rich repeat 113..136 CDD:275380 8/23 (35%)
LRR_8 135..195 CDD:290566 21/60 (35%)
LRR_4 135..175 CDD:289563 14/39 (36%)
leucine-rich repeat 137..160 CDD:275380 10/22 (45%)
leucine-rich repeat 161..184 CDD:275380 7/23 (30%)
leucine-rich repeat 185..209 CDD:275380 7/23 (30%)
leucine-rich repeat 210..231 CDD:275380 8/21 (38%)
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380
LRR_RI 93..384 CDD:238064 66/245 (27%)
leucine-rich repeat 107..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
LRR_8 154..214 CDD:290566 19/74 (26%)
leucine-rich repeat 155..178 CDD:275380 9/21 (43%)
leucine-rich repeat 179..203 CDD:275380 6/30 (20%)
leucine-rich repeat 204..227 CDD:275380 8/25 (32%)
LRR_8 226..286 CDD:290566 9/59 (15%)
leucine-rich repeat 228..251 CDD:275380 5/22 (23%)
leucine-rich repeat 252..275 CDD:275380 0/22 (0%)
LRR_8 276..335 CDD:290566 22/58 (38%)
leucine-rich repeat 276..300 CDD:275380 8/23 (35%)
leucine-rich repeat 301..324 CDD:275380 10/22 (45%)
leucine-rich repeat 325..349 CDD:275380 7/23 (30%)
LRR_8 349..409 CDD:290566 19/60 (32%)
leucine-rich repeat 350..373 CDD:275380 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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