DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5810 and CG18480

DIOPT Version :10

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_609761.1 Gene:CG18480 / 34920 FlyBaseID:FBgn0028518 Length:550 Species:Drosophila melanogaster


Alignment Length:273 Identity:60/273 - (21%)
Similarity:102/273 - (37%) Gaps:44/273 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ATCESQKLEEIAIDSLDCRENTCTNLKYPSASAVAYFSENVTKHLRKYETLVLHSSDLANLPRKI 82
            |.|.:::|....|:.....|  ..:|.|...:.:...|...|.||.   .|.|..:.:..|....
  Fly    58 AVCSAKRLISANIEIPTTVE--LLDLSYNDITTIDDDSFKTTIHLL---NLTLAHNAIHTLYGDA 117

  Fly    83 FLNLPQLVEFHVLECELQQIESVCFDGAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSDNQL 147
            |:.|.:|....:....|:||:....:....|..||..||.|..|.......:..|..|||.::|:
  Fly   118 FVELTRLRYLDLSYNRLEQIDEHILESNNQLIHLNLEGNKLSTLGKGPILRSPSLRSLNLRNSQV 182

  Fly   148 EDLPTTIFRPLKNLQKINLSNNRLITLSQHIFSQLGSLKSINVDSNQLVELPGELFRDQRKHLSE 212
            ..|.|.:...|..|::::|:.|.|:|||...|....:|.|:||:.|                   
  Fly   183 NQLGTQLLSALPQLRQLDLAQNLLLTLSPGDFHAPRNLASLNVEEN------------------- 228

  Fly   213 FSAQSNQLVRIPFNIFREIDHLSLSFNPQLRRLHLS-AKINELEATNCDLESVELDGRVIGVQLE 276
                       |||..|.:..::.....:...:.:| ....|::....|.|:|....:       
  Fly   229 -----------PFNCDRALAKVATGLRQRGVAIFMSNCMEEEVQDHQDDAEAVNFPNK------- 275

  Fly   277 ANPKLHELKISQP 289
             |.|...::..:|
  Fly   276 -NEKFESMEYLEP 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 LRR <61..353 CDD:443914 51/230 (22%)
leucine-rich repeat 65..88 CDD:275380 5/22 (23%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..209 CDD:275380 5/23 (22%)
leucine-rich repeat 210..231 CDD:275380 4/20 (20%)
CG18480NP_609761.1 LRR <66..>230 CDD:443914 45/198 (23%)
leucine-rich repeat 76..99 CDD:275380 5/24 (21%)
leucine-rich repeat 100..123 CDD:275380 6/25 (24%)
leucine-rich repeat 124..147 CDD:275380 4/22 (18%)
leucine-rich repeat 148..171 CDD:275380 7/22 (32%)
leucine-rich repeat 172..195 CDD:275380 8/22 (36%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)

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