DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5810 and kek5

DIOPT Version :9

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001245746.1 Gene:kek5 / 32930 FlyBaseID:FBgn0031016 Length:931 Species:Drosophila melanogaster


Alignment Length:273 Identity:71/273 - (26%)
Similarity:121/273 - (44%) Gaps:56/273 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SLDCRENTCTNLKYPSAS--AVAYFSENVTKHLRKYETLVLHSSDLANLP--RKIFLNLPQLVEF 92
            |.||:....|.:....::  .|..|:.|....||:.|.|      ||.||  .||||.       
  Fly    56 SADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREEFL------LAGLPNVHKIFLR------- 107

  Fly    93 HVLECELQQIESVCFDGAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSDNQLEDLPTTIFRP 157
               .|.:|::....|.|...|..|:..||.:|.|...||....:|..:.:::|::|.||..:|..
  Fly   108 ---NCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVN 169

  Fly   158 LKNLQKINLSNNRLITLSQHIFSQLGSLKSINVDSNQLVELPGELFRDQRK--HLS--------- 211
            |..|.:|...||||..:..|:|:...:|.:|:::.|:|..|..|.|:|.:|  |||         
  Fly   170 LSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETFKDLQKLMHLSLQGNAWNCS 234

  Fly   212 -------EFSAQSNQLVRIPFN----------IFREIDHLSLSFNPQLRRLHLSAKINELEATNC 259
                   :| |.|.:|...|.:          ::.|:...:.:..|::    |.:..:.:||.: 
  Fly   235 CELQDFRDF-AISKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRI----LGSVRSFIEANH- 293

  Fly   260 DLESVELDGRVIG 272
              :::.|..|::|
  Fly   294 --DNISLPCRIVG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 leucine-rich repeat 65..88 CDD:275380 10/24 (42%)
LRR_8 87..147 CDD:290566 14/59 (24%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 8/22 (36%)
LRR_8 135..195 CDD:290566 18/59 (31%)
LRR_4 135..175 CDD:289563 13/39 (33%)
leucine-rich repeat 137..160 CDD:275380 7/22 (32%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..209 CDD:275380 9/25 (36%)
leucine-rich repeat 210..231 CDD:275380 7/46 (15%)
kek5NP_001245746.1 LRR_RI <76..160 CDD:238064 29/99 (29%)
leucine-rich repeat 76..100 CDD:275380 10/29 (34%)
LRR_8 99..159 CDD:290566 19/69 (28%)
leucine-rich repeat 101..124 CDD:275380 8/32 (25%)
LRR 122..145 CDD:197688 8/22 (36%)
leucine-rich repeat 125..148 CDD:275380 8/22 (36%)
LRR_8 148..207 CDD:290566 18/58 (31%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 8/22 (36%)
LRR_8 197..>229 CDD:290566 12/31 (39%)
leucine-rich repeat 197..220 CDD:275380 8/22 (36%)
LRRCT 229..277 CDD:214507 6/48 (13%)
Ig 296..376 CDD:143165 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453621
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.