DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5810 and lron-4

DIOPT Version :10

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001309442.1 Gene:lron-4 / 183375 WormBaseID:WBGene00008051 Length:633 Species:Caenorhabditis elegans


Alignment Length:345 Identity:79/345 - (22%)
Similarity:141/345 - (40%) Gaps:71/345 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KYPSASAVAY----------FSENVTKHLR-------------------KYETLVLHSSDLANLP 79
            |.||..:::.          ..|.:|::||                   :.:.|...||...|:.
 Worm   270 KIPSLKSLSLSVIEITGKEDIPEGMTRNLRSIGFYDVKMNSIPNWIKTDQIQFLEFQSSISDNVD 334

  Fly    80 RKIFLNLPQLVEFHVLECELQQIESVCFDGAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSD 144
            ......||.|..|.:.|..|..|:|.....:..|..|....|::..:.:..|:..|:|:.|||:.
 Worm   335 MSALDELPTLEHFLLTESSLTSIKSPFLSKSSKLISLTLQCNSISSIAAGAFDHFTELQFLNLAG 399

  Fly   145 NQLEDLPTTIFRPLKNLQKINL-----SNNRLITLSQHIFSQLGSLKSINVDSNQ----LVELPG 200
            |::..||:.:...|.||..::|     |:|.:.|     :::|.....||..::.    |.::| 
 Worm   400 NRIASLPSNLLLNLNNLIVLDLKALDNSSNTIGT-----YNELSMQCQINQKASTVPVILDKMP- 458

  Fly   201 ELFRDQRKHLSEFSAQSNQLV--RIPFNIFREIDHLSLSFNPQLRRLHLSAKINELEATNCDLES 263
            ::.:.::....|...|.|.:.  :.....|:.::.|:|. |..|    |||:...|| |.|:|..
 Worm   459 DVSKPEKLVALEIRGQENIMKNDKSFLKNFKNLEILNLG-NLGL----LSAQNLSLE-TLCNLID 517

  Fly   264 VELDGRV------IGVQLEANPKLHELKISQPQDLEHLYLANTNLYRLDFLSKASKL-----VDL 317
            :.|.|..      |...|..|..|..|::.||..:..  :.|:   .:.|:..||::     :.|
 Worm   518 LNLVGNPLSDKDWISEDLFVNLNLQRLRMGQPSSMTS--IPNS---LVAFMRTASQIMYSTPISL 577

  Fly   318 DVTDIVNL---ADLPKITSA 334
            :..||...   .|..:|:||
 Worm   578 NSVDIYKRKIGCDYDRISSA 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 LRR <61..353 CDD:443914 74/318 (23%)
leucine-rich repeat 65..88 CDD:275380 5/22 (23%)
leucine-rich repeat 89..112 CDD:275380 6/22 (27%)
leucine-rich repeat 113..136 CDD:275380 4/22 (18%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 6/27 (22%)
leucine-rich repeat 185..209 CDD:275380 4/27 (15%)
leucine-rich repeat 210..231 CDD:275380 4/22 (18%)
lron-4NP_001309442.1 LRR <266..>404 CDD:443914 29/133 (22%)
leucine-rich repeat 274..300 CDD:275378 3/25 (12%)
leucine-rich repeat 301..343 CDD:275378 5/41 (12%)
LRR_8 342..402 CDD:404697 17/59 (29%)
leucine-rich repeat 344..367 CDD:275378 6/22 (27%)
leucine-rich repeat 368..391 CDD:275378 4/22 (18%)
leucine-rich repeat 392..404 CDD:275378 5/11 (45%)

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