DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5810 and LRRC70

DIOPT Version :10

Sequence 1:NP_650952.2 Gene:CG5810 / 42513 FlyBaseID:FBgn0038866 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_852607.3 Gene:LRRC70 / 100130733 HGNCID:35155 Length:622 Species:Homo sapiens


Alignment Length:351 Identity:82/351 - (23%)
Similarity:144/351 - (41%) Gaps:58/351 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RENTCTNL-------KYPSASAVAYFSENVTKHLRKYETLVLHSSDLANLPRKIFLNLPQLVEFH 93
            |:..|.||       .:|.::...|.:.|...::.:.|...|||                ||..:
Human    42 RQINCRNLGLSSIPKNFPESTVFLYLTGNNISYINESELTGLHS----------------LVALY 90

  Fly    94 VLECELQQIESVCFDGAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSDNQLEDLPTTIFRPL 158
            :....:..:....|...::|..|....|.::.||...|:....|..|.|..||:..:|..:|..|
Human    91 LDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDL 155

  Fly   159 KNLQKINLSNNRLITLSQHIFSQLGSLKSINVDSNQLVELPGELFRDQRKHLSEFSA---QSNQL 220
            .::|.:||..|||..|....|..:.:|:.:::.:|.::.:....|    :||...:.   .||.|
Human   156 VSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGF----QHLENLACLYLGSNNL 216

  Fly   221 VRIP---FNIFREIDHLSLSFNP----QLRRLHLSAKINELEATNCDLESVELDGRVIGVQLEAN 278
            .::|   |.:.:.:..||||.||    |.......|.:..|...|..:.:|..||          
Human   217 TKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDG---------- 271

  Fly   279 PKLHELKISQPQDLEHLYLANTNLYRL--DFLSKASKLV--DLDVTDIVNLADLPKITSAKGLER 339
                   .|...:|:||.|::.:|..|  |..|....|:  .||...|:::.:.........|:.
Human   272 -------FSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKI 329

  Fly   340 LSFTYDNLTSNHMDMLPHLKDLNYLE 365
            |:.:::|||:.|..:|..|..|.:|:
Human   330 LNLSFNNLTALHPRVLKPLSSLIHLQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5810NP_650952.2 LRR <61..353 CDD:443914 71/305 (23%)
leucine-rich repeat 65..88 CDD:275380 4/22 (18%)
leucine-rich repeat 89..112 CDD:275380 3/22 (14%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..209 CDD:275380 3/23 (13%)
leucine-rich repeat 210..231 CDD:275380 6/26 (23%)
LRRC70NP_852607.3 LRRNT 31..59 CDD:396168 4/16 (25%)
LRR 49..>383 CDD:443914 79/344 (23%)
LRR 1 61..82 3/20 (15%)
leucine-rich repeat 65..85 CDD:275380 4/19 (21%)
LRR 2 85..106 4/36 (11%)
leucine-rich repeat 86..109 CDD:275380 3/22 (14%)
LRR 3 109..130 6/20 (30%)
leucine-rich repeat 110..133 CDD:275380 6/22 (27%)
LRR 4 133..154 7/20 (35%)
leucine-rich repeat 134..157 CDD:275380 8/22 (36%)
LRR 5 157..178 8/20 (40%)
leucine-rich repeat 158..181 CDD:275380 8/22 (36%)
LRR 6 181..202 3/24 (13%)
leucine-rich repeat 182..205 CDD:275380 5/26 (19%)
LRR 7 205..226 5/20 (25%)
leucine-rich repeat 206..229 CDD:275380 5/22 (23%)
LRR 8 229..250 7/20 (35%)
leucine-rich repeat 230..253 CDD:275380 7/22 (32%)
LRR 9 253..274 5/37 (14%)
leucine-rich repeat 254..277 CDD:275380 6/39 (15%)
LRR 10 277..298 7/20 (35%)
leucine-rich repeat 278..301 CDD:275380 8/22 (36%)
LRR 11 301..322 4/20 (20%)
leucine-rich repeat 302..326 CDD:275380 4/23 (17%)
LRR 12 326..347 7/20 (35%)
leucine-rich repeat 327..348 CDD:275380 7/20 (35%)

Return to query results.
Submit another query.