DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and AT1G33670

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_174628.1 Gene:AT1G33670 / 840258 AraportID:AT1G33670 Length:455 Species:Arabidopsis thaliana


Alignment Length:451 Identity:106/451 - (23%)
Similarity:174/451 - (38%) Gaps:132/451 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 SIGADKLVILLLSDNHIEVLPTKTFRGAGNLEFIF-----LNRNKLGKLQ--AGAFDNLL----K 190
            :|..|::.::.| |.:.:|  .:||. :|.:..:.     ||..:|..|:  .|:|.:.|    |
plant    69 TIHGDRVTMMAL-DGNTDV--GETFL-SGTISPLLAKLHHLNEIRLTNLRKITGSFPHFLFKLPK 129

  Fly   191 LQYLDLTENRLEA-LAADVFAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQNNRLREVGE 254
            |:.:.|..|||.. |.|::.| |.:|..:.:|||:.:.......:....||.:.:..|||..:..
plant   130 LRTVYLENNRLSGPLPANIGA-LSNLEILSVAGNRFSGSIPSSMSKLTSLLQLKLNGNRLSGIFP 193

  Fly   255 YAFRSRGRHHQMQYVDLSNNPELVVLLLNINATNLTARNCSLDRVNLYGSVTNVDLSDNRVRELY 319
            ..|:|.   .|::::|||:|                                  ..|.|      
plant   194 DIFKSM---RQLRFLDLSSN----------------------------------RFSGN------ 215

  Fly   320 FPASEALEHLVLRNNSLVQLASLSRVPRLRHLDVADNPNLGQLPDGW-RTPHLEMLVLRNTGQME 383
            .|:|               :|||:  |.|..|:|..|...|.:||.. |...|..|.|...|...
plant   216 LPSS---------------IASLA--PTLSTLEVGHNKLSGTIPDYLSRFELLSALNLSRNGYTG 263

  Fly   384 LPLEALQGMQNLQKLDISGNNLTEIDPSAFPTLTQLTHFYIHGNNWNCFSLRNIMD--------- 439
            :...:...:.|:..||:|.|.||    ..||.|..|...|:| .::|.|.|..|.:         
plant   264 VVPMSFANLTNIIFLDLSHNLLT----GPFPVLNSLGIEYLH-LSYNRFHLETIPEWVTLSKFIY 323

  Fly   440 -VLIRANGIAYTVDNYDPDFPGEYFHGIACMYRLPEKEGVDSSSSSEISASVESSPITSSSDPSE 503
             :.:...||..::|::.|.....|.|             :| .|.:|||    .|||        
plant   324 SLKLAKCGIKMSLDHWMPADTSFYHH-------------ID-FSENEIS----GSPI-------- 362

  Fly   504 VDKLRDELKAVVQ-HFDS---KFDL------IFSKLAQLNEQIQAFEVLNKTVWSQVTLSV 554
              :..:::..:|: |...   :|||      ||.|...|:..: .|..:..||....||::
plant   363 --RFFNQMDFMVEFHAPGNKLQFDLGKLKFGIFLKTLDLSRNL-VFGKVPVTVTRLQTLNL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 1/4 (25%)
LRR_RI 143..407 CDD:238064 65/276 (24%)
leucine-rich repeat 143..166 CDD:275380 5/22 (23%)
LRR_8 166..225 CDD:290566 21/70 (30%)
leucine-rich repeat 167..190 CDD:275380 7/33 (21%)
leucine-rich repeat 191..214 CDD:275380 9/23 (39%)
leucine-rich repeat 215..238 CDD:275380 4/22 (18%)
leucine-rich repeat 239..265 CDD:275380 7/25 (28%)
leucine-rich repeat 266..325 CDD:275380 8/58 (14%)
LRR_8 304..357 CDD:290566 11/52 (21%)
leucine-rich repeat 326..347 CDD:275380 3/20 (15%)
leucine-rich repeat 348..394 CDD:275380 12/46 (26%)
LRR_8 369..428 CDD:290566 17/58 (29%)
LRR_4 393..433 CDD:289563 14/39 (36%)
leucine-rich repeat 395..418 CDD:275380 9/22 (41%)
AT1G33670NP_174628.1 LRRNT_2 27..66 CDD:285463
LRR_RI <115..>286 CDD:238064 54/231 (23%)
leucine-rich repeat 130..153 CDD:275380 9/23 (39%)
LRR_8 152..212 CDD:290566 16/96 (17%)
leucine-rich repeat 154..177 CDD:275380 4/22 (18%)
leucine-rich repeat 178..201 CDD:275380 7/25 (28%)
leucine-rich repeat 202..226 CDD:275380 11/80 (14%)
LRR_8 225..285 CDD:290566 18/59 (31%)
leucine-rich repeat 227..250 CDD:275380 8/22 (36%)
leucine-rich repeat 251..274 CDD:275380 4/22 (18%)
leucine-rich repeat 275..295 CDD:275380 9/23 (39%)
leucine-rich repeat 325..414 CDD:275380 26/117 (22%)
leucine-rich repeat 415..441 CDD:275380 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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