DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and AT1G33590

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001323401.1 Gene:AT1G33590 / 840253 AraportID:AT1G33590 Length:514 Species:Arabidopsis thaliana


Alignment Length:306 Identity:74/306 - (24%)
Similarity:114/306 - (37%) Gaps:75/306 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 NLEFIFLNRNKL-GKLQA-----------------------GAFDNLLKLQYLDLTENRLEALAA 206
            ||:::::..|:| |.|.|                       .:..||..|..|.|..|.|.....
plant   164 NLKYVYIENNRLSGTLPANIGALSQLEAFSLEGNRFTGPIPSSISNLTLLTQLKLGNNLLTGTIP 228

  Fly   207 DVFAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQNNRLREVGEYAFRSRGRHHQMQYVDL 271
            ...|.||.:.::.|.||:||....|:|...|:|.|:.:..|...                     
plant   229 LGVANLKLMSYLNLGGNRLTGTIPDIFKSMPELRSLTLSRNGFS--------------------- 272

  Fly   272 SNNPELVVLLLNINATNLTARNCSLDRVNLYGSVTN----------VDLSDNRVRELYFPASEA- 325
            .|.|..:..|..|      .|...|....|.|::.|          :|||.||...: .|.|.| 
plant   273 GNLPPSIASLAPI------LRFLELGHNKLSGTIPNFLSNFKALDTLDLSKNRFSGV-IPKSFAN 330

  Fly   326 ---LEHLVLRNNSLVQLASLSRVPRLRHLDVADNP-NLGQLPDGWRT--PHLEMLVLRNTGQMEL 384
               :.:|.|.:|.|.....:..|..:..||::.|. :|..:|. |.|  |.:..|.|...| :::
plant   331 LTKIFNLDLSHNLLTDPFPVLNVKGIESLDLSYNQFHLNTIPK-WVTSSPIIFSLKLAKCG-IKM 393

  Fly   385 PLEALQGMQNL--QKLDISGNNLTEIDPSAFPTLTQ-LTHFYIHGN 427
            .|:..:..|..  ..:|:|.|.:|. .|:.|...|: |..|...||
plant   394 SLDDWKPAQTFYYDFIDLSENEITG-SPARFLNQTEYLVEFKAAGN 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380
LRR_RI 143..407 CDD:238064 66/283 (23%)
leucine-rich repeat 143..166 CDD:275380 74/306 (24%)
LRR_8 166..225 CDD:290566 20/82 (24%)
leucine-rich repeat 167..190 CDD:275380 8/46 (17%)
leucine-rich repeat 191..214 CDD:275380 7/22 (32%)
leucine-rich repeat 215..238 CDD:275380 7/22 (32%)
leucine-rich repeat 239..265 CDD:275380 3/25 (12%)
leucine-rich repeat 266..325 CDD:275380 16/68 (24%)
LRR_8 304..357 CDD:290566 16/66 (24%)
leucine-rich repeat 326..347 CDD:275380 5/20 (25%)
leucine-rich repeat 348..394 CDD:275380 12/48 (25%)
LRR_8 369..428 CDD:290566 17/62 (27%)
LRR_4 393..433 CDD:289563 12/38 (32%)
leucine-rich repeat 395..418 CDD:275380 6/24 (25%)
AT1G33590NP_001323401.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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