DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and RLP31

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_187188.2 Gene:RLP31 / 819701 AraportID:AT3G05370 Length:860 Species:Arabidopsis thaliana


Alignment Length:424 Identity:101/424 - (23%)
Similarity:173/424 - (40%) Gaps:92/424 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EHSRTLIFENCT-FTNFPLRLFYTLEVSELDMRGCGIRFIYWENFSIG--------ADKLVILLL 148
            :|...|...||: :.:.|..|.....::.||:.         .|:.:|        ..:|.||.|
plant   108 QHLHNLTLSNCSLYGDIPSSLGNLFRLTLLDLS---------YNYLVGQVPPSIGNLSRLTILDL 163

  Fly   149 SDNH-IEVLPTKTFRGAGN---LEFIFLNRNKLGKLQAGAFDNLLKLQYLDLTENRLEALAADVF 209
            .||. :..||.    ..||   ||::..:.||........|.||.||..::|..|..|::.....
plant   164 WDNKLVGQLPA----SIGNLTQLEYLIFSHNKFSGNIPVTFSNLTKLLVVNLYNNSFESMLPLDM 224

  Fly   210 AGLKSLRHVGLAGNQLT-TIESDLFAHNPDLLSVAMQNNRLREVGEYAFRSR-GRHHQMQYVDLS 272
            :|.::|.:..:..|..: |:...||. .|.|....::.|..:  |...||:. ....::||:.||
plant   225 SGFQNLDYFNVGENSFSGTLPKSLFT-IPSLRWANLEGNMFK--GPIEFRNMYSPSTRLQYLFLS 286

  Fly   273 NN------PELVVLLLNINATNLTARNC------------SLDRVNLYGS-------VTNVDLSD 312
            .|      |:.:...||:...:|:..|.            :|:||||.|:       ..|:. |.
plant   287 QNKFDGPIPDTLSQYLNLIELDLSFNNLTGSFPTFLFTIPTLERVNLEGNHLKGPVEFGNMS-SS 350

  Fly   313 NRVRELYFPASE-------------ALEHLVLRNNSLVQL--ASLSRVPRLRHLDVADNPNLGQL 362
            :.::.|.|..:|             .||.|.|..|:.:..  .|:|::.:|.:..:.||..:|::
plant   351 SSLKFLNFAQNEFNGSIPESVSQYLNLEELHLSFNNFIGTIPRSISKLAKLEYFCLEDNNMVGEV 415

  Fly   363 PDG-WRTPHLEMLVLRNT-----GQMELPLEALQGMQNLQKLDISGNNLTEIDPSAFPTLTQLTH 421
            |.. ||   |.|:.|.|.     |:....|:..|    :|.||:|.|:.....|.....|..|..
plant   416 PSWLWR---LTMVALSNNSFNSFGESSEGLDETQ----VQWLDLSSNSFQGPFPHWICKLRSLEI 473

  Fly   422 FYIHGNNWN-----CFS--LRNIMDVLIRANGIA 448
            ..:..|.:|     |.|  :.::.|:::|.|.::
plant   474 LIMSDNRFNGSIPPCLSSFMVSLTDLILRNNSLS 507

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 4/31 (13%)
LRR_RI 143..407 CDD:238064 81/315 (26%)
leucine-rich repeat 143..166 CDD:275380 8/23 (35%)
LRR_8 166..225 CDD:290566 16/61 (26%)
leucine-rich repeat 167..190 CDD:275380 7/22 (32%)
leucine-rich repeat 191..214 CDD:275380 5/22 (23%)
leucine-rich repeat 215..238 CDD:275380 5/23 (22%)
leucine-rich repeat 239..265 CDD:275380 5/26 (19%)
leucine-rich repeat 266..325 CDD:275380 21/96 (22%)
LRR_8 304..357 CDD:290566 14/74 (19%)
leucine-rich repeat 326..347 CDD:275380 7/22 (32%)
leucine-rich repeat 348..394 CDD:275380 14/51 (27%)
LRR_8 369..428 CDD:290566 15/63 (24%)
LRR_4 393..433 CDD:289563 11/44 (25%)
leucine-rich repeat 395..418 CDD:275380 7/22 (32%)
RLP31NP_187188.2 leucine-rich repeat 422..446 CDD:275380 6/23 (26%)
leucine-rich repeat 447..470 CDD:275380 7/22 (32%)
leucine-rich repeat 471..495 CDD:275380 5/23 (22%)
leucine-rich repeat 496..519 CDD:275380 3/12 (25%)
leucine-rich repeat 520..543 CDD:275380
leucine-rich repeat 544..565 CDD:275380
leucine-rich repeat 568..593 CDD:275380
leucine-rich repeat 594..621 CDD:275380
leucine-rich repeat 622..692 CDD:275380
PLN00113 <681..758 CDD:331614
leucine-rich repeat 693..716 CDD:275380
leucine-rich repeat 717..738 CDD:275380
LRRNT_2 33..78 CDD:311940
PLN00113 60..>610 CDD:331614 101/424 (24%)