DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and Toll-4

DIOPT Version :10

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster


Alignment Length:594 Identity:122/594 - (20%)
Similarity:215/594 - (36%) Gaps:194/594 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DLPTEVRIAEDGTTYEVGDEEHSRTLIFENCTFTNFPLRLF-----YTLEVSELDMRGCGIRFIY 132
            |...:::..|..|..|:  .|.|:...|:|  ||.|....:     :||.::|:   .|.::.  
  Fly   321 DNMVDLKSFEKFTNLEI--IEVSQYKGFKN--FTAFICEPYKSHCKFTLGINEV---ACPLKC-- 376

  Fly   133 WENFSIGADKLVI------------------------LLLSDNHIEVLPTKTFRGAGNLEFIFLN 173
              |.|...||..:                        |:...|.:..||..:..|..||:.:.::
  Fly   377 --NCSYNRDKSQLEIDCWQKNLTTIPSLPVPKKGSSALVFQSNLLAELPDNSLEGYHNLKSLDVS 439

  Fly   174 RNKLGKLQAGAFDNLLKLQYLDLTENRLEALAADVFAGLKSLRHVGLAGNQLTTI-----ESDLF 233
            .|:|..|.......  .|.|||:..|::..|:..|...|.|:......||:.:..     ..:.|
  Fly   440 YNQLTSLSVSQLPE--SLHYLDIRHNKITTLSPQVVEYLYSVNVFNQYGNKWSIYCDEYHLQEFF 502

  Fly   234 AHNPDLLSVAMQNNRLREVGEYAFRSRGRHHQMQYVDLSNNPELV--VLLLNINATNLTARNCSL 296
            .:...||.:  :.::.:.:             |:|::||:....|  ..:.||:...|.|....:
  Fly   503 WYKAKLLRI--KTSKFQTI-------------MEYIELSSKGSFVENFFVQNIDQLYLEANEDEI 552

  Fly   297 DRVNLYGSVTNVDLSDNRVRELYF--PASEALEH-----------LVLRN-NS------------ 335
              ::.:|.      ||.     ||  ...|||.|           ::|.: ||            
  Fly   553 --IDAFGP------SDK-----YFNLKLMEALNHAIWLFSGEFDEIILHHLNSPCPYRCSCCFEW 604

  Fly   336 -----LVQLASLSR--VPRL---------RHLD--------------VADNPNLGQLPDGWRTPH 370
                 |:...:||.  .|||         .:||              ||.:.::.:|       |
  Fly   605 HTGEFLINCRNLSLDIYPRLPNSIPYKTTLYLDRNEIRKLTNTESLVVAGHASIHKL-------H 662

  Fly   371 LEMLVLRNTGQMELPLEALQGMQNLQKLDISGNNLTEIDPSAFPTL---TQLTHFYIHGNNWNC- 431
            :...:||     ||||..|.  :|:..||:..|.|..:|......|   ..:|...:.||.|.| 
  Fly   663 MSQNLLR-----ELPLHLLP--ENITYLDVRNNLLKYLDDGVIAFLEYRENITKIELSGNPWECN 720

  Fly   432 FSLRNIMDVLIRANGIAY-----TVDNYDPDFPGEYFHGIACMYRLPEKEGVDSSSSSEISASVE 491
            ...:..:..|.|...:.|     .|:..|...|.:.   |.|         ||:|:|..::..|:
  Fly   721 CKAKAFLSFLRRHEPMEYETVLRRVEITDDKCPEDC---ICC---------VDTSNSDSLAYVVD 773

  Fly   492 SSPITSSSDPSEVDKL-------------RDELK----AVVQHFDS--KFDLIFSKLA---QLNE 534
                .|..:.||:.:|             |:.||    :::..:.|  :|.|..::|:   ||.:
  Fly   774 ----CSGKELSEIPQLPTPTYGQTTLVFERNSLKKWPSSLLPGYSSVTRFYLAHNRLSDIDQLPD 834

  Fly   535 QIQAFEVLN 543
            :::..::.|
  Fly   835 KLEYLDISN 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 LRR 107..>410 CDD:443914 78/394 (20%)
leucine-rich repeat 118..142 CDD:275380 4/23 (17%)
leucine-rich repeat 143..166 CDD:275380 5/46 (11%)
leucine-rich repeat 167..190 CDD:275380 4/22 (18%)
leucine-rich repeat 191..214 CDD:275380 8/22 (36%)
leucine-rich repeat 215..238 CDD:275380 3/27 (11%)
leucine-rich repeat 239..265 CDD:275380 2/25 (8%)
leucine-rich repeat 266..325 CDD:275380 14/62 (23%)
leucine-rich repeat 326..347 CDD:275380 8/51 (16%)
leucine-rich repeat 348..394 CDD:275380 14/68 (21%)
leucine-rich repeat 395..418 CDD:275380 6/25 (24%)
Toll-4NP_523519.2 LRR 210..>470 CDD:443914 35/161 (22%)
leucine-rich repeat 264..287 CDD:275380
leucine-rich repeat 288..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380 2/12 (17%)
leucine-rich repeat 335..386 CDD:275380 16/61 (26%)
PRK15370 <381..>482 CDD:185268 21/102 (21%)
leucine-rich repeat 388..408 CDD:275380 0/19 (0%)
leucine-rich repeat 412..432 CDD:275378 5/19 (26%)
LRR <416..591 CDD:443914 42/204 (21%)
leucine-rich repeat 433..454 CDD:275378 4/22 (18%)
leucine-rich repeat 455..478 CDD:275378 8/22 (36%)
leucine-rich repeat 479..490 CDD:275378 2/10 (20%)
leucine-rich repeat 632..657 CDD:275378 4/24 (17%)
leucine-rich repeat 658..679 CDD:275378 9/34 (26%)
leucine-rich repeat 680..706 CDD:275378 6/25 (24%)
PCC 684..>771 CDD:188093 22/98 (22%)
leucine-rich repeat 707..719 CDD:275378 4/11 (36%)
leucine-rich repeat 771..791 CDD:275380 5/23 (22%)
PRK15370 <793..>877 CDD:185268 10/51 (20%)
leucine-rich repeat 793..815 CDD:275378 3/21 (14%)
leucine-rich repeat 816..835 CDD:275378 5/18 (28%)
leucine-rich repeat 836..859 CDD:275378 1/8 (13%)
TIR 974..1110 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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