DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and Nrros

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001020166.1 Gene:Nrros / 303875 RGDID:1310771 Length:692 Species:Rattus norvegicus


Alignment Length:594 Identity:138/594 - (23%)
Similarity:219/594 - (36%) Gaps:175/594 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VDSGSSRIVLVSSLEGHCQTEGKVTSCRGFEFAGEDEKATFDLPTEVRIAEDGTTYEVGDEEHSR 96
            |:..|.|....::.:|.|:...:|..||....|        .:|:             |...|||
  Rat    17 VEWRSGRGTATAASQGGCKVVDRVADCRSLNLA--------SVPS-------------GLPAHSR 60

  Fly    97 TLIFENCTFTNFPLRLF--YTLE----VSELDMRGCGI-RFIYW-------------------EN 135
            .|:.:    .| |||:.  ::|:    :.:|.:..|.: |..:|                   ||
  Rat    61 MLVLD----AN-PLRVLWNHSLQAYPRLEDLSLHSCHLDRISHWAFHEQGHLQNLVLADNRLSEN 120

  Fly   136 FSIGADKLVILL------LSDNHI-EVLPTKTFRGAGNLEFIFLNRNKLGKLQAGAFDNLLKLQY 193
            :...|..|..||      ||.|.: |.:.....:...:||.:.|.||.|.:|....|:.|.:|..
  Rat   121 YKESATALHTLLRLRRLDLSGNSLTEDMAALMLQNLSSLEVVSLARNTLMRLDDSVFEGLERLVE 185

  Fly   194 LDLTENRLEALAADVFAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQNNRLREVG----- 253
            |||..|.:..:....|.||..||.:.||.|.|           |.::..::...|...|.     
  Rat   186 LDLQRNYIFEIEGGAFDGLTELRRLNLAYNNL-----------PCIVDFSLTQLRFLNVSYNILE 239

  Fly   254 -------EYAFRSRGRHHQMQYVDLSNNPELVVLLLNINATNLTARNCSLDRVNLYGSVTNVDLS 311
                   |.||       :::.:|||:|..|...||         ..|        |.:..:.|.
  Rat   240 WFLAAREEAAF-------ELEILDLSHNQLLFFPLL---------PQC--------GKLHTLLLQ 280

  Fly   312 DNRV---RELY---FPASEALEHLVLRNN-------SLVQLASLSRVPRLRHLDVADNPNLGQLP 363
            ||.:   ||||   .|.....:.|::..|       ||.:..|.|.:..||.||::.| .|..||
  Rat   281 DNSMGFYRELYNTSSPQEMVAQFLLVDGNVTNITTVSLWEEFSSSDLSALRFLDMSQN-QLRHLP 344

  Fly   364 DGW--RTPHLEMLVLRNTGQMELPLEALQGMQNLQKLDISGNNLTEIDPSAFPTLTQLTHFYIHG 426
            ||:  :||.|..|.|......:|.:...:....|.:||:|.|.|.|:..:  |.||.        
  Rat   345 DGFLKKTPSLSHLNLNQNCLTKLHIREHEPPGALTELDLSRNQLAELHLA--PGLTG-------- 399

  Fly   427 NNWNCFSLRNIMDVLIRANGIAYTVDNYDPDFPGEYFHGIACMYRLPEKEGVDSSSSSEISASVE 491
                  ||:|:....:.:|.:.        ..|...||..:.:..|       ..|.::||...:
  Rat   400 ------SLKNLRVFNLSSNQLL--------GVPTGLFHSASSITTL-------DMSHNQISLCPQ 443

  Fly   492 SSPITSSSDPSEVD-----KLRD------ELKAV---------VQHFD--SKFDLIFSKLAQLNE 534
            :.|:......|.||     .||.      .|||:         :.|.|  |.:.::...::.|:.
  Rat   444 TVPLDWEEPSSCVDFRNMASLRSLSLDGCGLKALQDCPFQGTSLTHLDLSSNWGILNGSVSPLSA 508

  Fly   535 QIQAFEVLN 543
            .....:||:
  Rat   509 VAPTLQVLS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 7/43 (16%)
LRR_RI 143..407 CDD:238064 81/297 (27%)
leucine-rich repeat 143..166 CDD:275380 7/29 (24%)
LRR_8 166..225 CDD:290566 22/58 (38%)
leucine-rich repeat 167..190 CDD:275380 9/22 (41%)
leucine-rich repeat 191..214 CDD:275380 8/22 (36%)
leucine-rich repeat 215..238 CDD:275380 6/22 (27%)
leucine-rich repeat 239..265 CDD:275380 5/37 (14%)
leucine-rich repeat 266..325 CDD:275380 17/64 (27%)
LRR_8 304..357 CDD:290566 18/65 (28%)
leucine-rich repeat 326..347 CDD:275380 6/27 (22%)
leucine-rich repeat 348..394 CDD:275380 16/47 (34%)
LRR_8 369..428 CDD:290566 15/58 (26%)
LRR_4 393..433 CDD:289563 10/39 (26%)
leucine-rich repeat 395..418 CDD:275380 9/22 (41%)
NrrosNP_001020166.1 leucine-rich repeat 39..57 CDD:275380 6/38 (16%)
LRR 1. /evidence=ECO:0000255 58..79 9/25 (36%)
leucine-rich repeat 60..82 CDD:275380 7/26 (27%)
LRR 2. /evidence=ECO:0000255 82..103 4/20 (20%)
leucine-rich repeat 83..106 CDD:275380 4/22 (18%)
LRR 3. /evidence=ECO:0000255 106..127 3/20 (15%)
leucine-rich repeat 107..158 CDD:275380 10/50 (20%)
LRR 4. /evidence=ECO:0000255 133..155 4/21 (19%)
LRR_8 157..217 CDD:290566 22/59 (37%)
LRR 5. /evidence=ECO:0000255 158..179 8/20 (40%)
leucine-rich repeat 159..182 CDD:275380 9/22 (41%)
LRR 6. /evidence=ECO:0000255 182..203 6/20 (30%)
leucine-rich repeat 183..206 CDD:275380 8/22 (36%)
LRR 7. /evidence=ECO:0000255 206..227 7/31 (23%)
leucine-rich repeat 207..251 CDD:275380 12/61 (20%)
LRR 8. /evidence=ECO:0000255 228..239 2/10 (20%)
LRR 9. /evidence=ECO:0000255 251..272 8/37 (22%)
leucine-rich repeat 252..273 CDD:275380 8/37 (22%)
LRR 10. /evidence=ECO:0000255 273..294 7/20 (35%)
leucine-rich repeat 274..329 CDD:275380 14/54 (26%)
LRR_RI 328..549 CDD:238064 52/222 (23%)
LRR 11. /evidence=ECO:0000255 329..350 10/21 (48%)
LRR_8 330..388 CDD:290566 21/58 (36%)
leucine-rich repeat 330..353 CDD:275380 11/23 (48%)
LRR 12. /evidence=ECO:0000255 353..374 4/20 (20%)
leucine-rich repeat 354..377 CDD:275380 4/22 (18%)
LRR 13. /evidence=ECO:0000255 377..398 8/22 (36%)
LRR_8 378..438 CDD:290566 19/90 (21%)
leucine-rich repeat 378..403 CDD:275380 12/40 (30%)
LRR 14. /evidence=ECO:0000255 403..424 4/28 (14%)
leucine-rich repeat 404..427 CDD:275380 4/30 (13%)
LRR 15. /evidence=ECO:0000255 427..448 5/27 (19%)
leucine-rich repeat 428..463 CDD:275380 8/41 (20%)
LRR_8 463..548 CDD:290566 11/55 (20%)
LRR 16. /evidence=ECO:0000255 463..484 5/20 (25%)
leucine-rich repeat 464..486 CDD:275380 5/21 (24%)
LRR 17. /evidence=ECO:0000255 486..507 3/20 (15%)
leucine-rich repeat 487..512 CDD:275380 4/24 (17%)
LRR 18. /evidence=ECO:0000255 512..533 2/6 (33%)
leucine-rich repeat 513..537 CDD:275380 2/5 (40%)
LRR_8 537..595 CDD:290566
LRR_4 537..574 CDD:289563
LRR 19. /evidence=ECO:0000255 537..558
leucine-rich repeat 538..559 CDD:275380
LRR 20. /evidence=ECO:0000255 559..580
LRR 21. /evidence=ECO:0000255 585..605
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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