DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cDIP and Nrros

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001334110.1 Gene:Nrros / 224109 MGIID:2445095 Length:693 Species:Mus musculus


Alignment Length:554 Identity:130/554 - (23%)
Similarity:207/554 - (37%) Gaps:159/554 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CLPFLCSYLLI---SLAATATTDEDADADVDSGSSRIVLVSSLEGHCQTEGKVTSCRGFEFAGED 67
            ||.|  .:|::   |...|||                   ::.:|.|:....|..|||...|   
Mouse     9 CLGF--HFLIVEWRSGPGTAT-------------------AASQGGCKVVDGVADCRGLNLA--- 49

  Fly    68 EKATFDLPTEVRIAEDGTTYEVGDEEHSRTLIFENCTFTNFPLRLFYTLEVSELDMRGCGIRFIY 132
                 .:|:.:             ..|||.||.:    .| ||:          |:         
Mouse    50 -----SVPSSL-------------PPHSRMLILD----AN-PLK----------DL--------- 72

  Fly   133 WENFSIGA-DKLVILLLSDNHIEVLPTKTFRGAGNLEFIFLNRNKLG---KLQAGAFDNLLKLQY 193
            | |.|:.| .:|..|.|...|::.:....||..|:|..:.|..|:|.   |..|.|...||.|:.
Mouse    73 W-NHSLQAYPRLENLSLHSCHLDRISHYAFREQGHLRNLVLADNRLSENYKESAAALHTLLGLRR 136

  Fly   194 LDLTENRL-EALAADVFAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQNNRLREVGEYAF 257
            |||:.|.| |.:||.:...|.||..|.||.|.|..::..:|.....|:.:.:|.|.:.|:...||
Mouse   137 LDLSGNSLTEDMAALMLQNLSSLEVVSLARNTLMRLDDSIFEGLEHLVELDLQRNYIFEIEGGAF 201

  Fly   258 RSRGRHHQMQYVDLS-NNPELVVLLLNINATNLTARNCSLDRVNLY------------------- 302
            ...   .:::.::|: ||...:|   :.:.|.|...|.|.:.:..:                   
Mouse   202 DGL---TELRRLNLAYNNLPCIV---DFSLTQLRFLNVSYNILEWFLAAREEVAFELEILDLSHN 260

  Fly   303 -----------GSVTNVDLSDNRV---RELYFPAS--EALEHLVLRNNSLVQLA--------SLS 343
                       |.:..:.|.||.:   ||||..:|  |.:...:|.:.::..:.        |.|
Mouse   261 QLLFFPLLPQCGKLHTLLLQDNNMGFYRELYNTSSPQEMVAQFLLVDGNVTNITTVNLWEEFSSS 325

  Fly   344 RVPRLRHLDVADNPNLGQLPDGW--RTPHLEMLVLRNTGQMELPLEALQGMQNLQKLDISGNNLT 406
            .:..||.||::.| ....||||:  :||.|..|.|.......|.:...:....|.:||:|.|.|.
Mouse   326 DLSALRFLDMSQN-QFRHLPDGFLKKTPSLSHLNLNQNCLKMLHIREHEPPGALTELDLSHNQLA 389

  Fly   407 EIDPSAFPTLTQLTHFYIHGNNWNCFSLRNIMDVLIRANGIAYTVDNYDPDFPGEYFHGIACMYR 471
            |:..:  |.||.              ||||:....:.:|.:.        ..|...|...:.:..
Mouse   390 ELHLA--PGLTG--------------SLRNLRVFNLSSNQLL--------GVPTGLFDNASSITT 430

  Fly   472 LPEKEGVDSSSSSEISASVESSPITSSSDPSEVD 505
            :       ..|.::||...:..|:.....||.||
Mouse   431 I-------DMSHNQISLCPQMVPVDWEGPPSCVD 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 5/24 (21%)
LRR_RI 143..407 CDD:238064 82/313 (26%)
leucine-rich repeat 143..166 CDD:275380 6/22 (27%)
LRR_8 166..225 CDD:290566 25/62 (40%)
leucine-rich repeat 167..190 CDD:275380 8/25 (32%)
leucine-rich repeat 191..214 CDD:275380 10/23 (43%)
leucine-rich repeat 215..238 CDD:275380 7/22 (32%)
leucine-rich repeat 239..265 CDD:275380 6/25 (24%)
leucine-rich repeat 266..325 CDD:275380 17/94 (18%)
LRR_8 304..357 CDD:290566 16/65 (25%)
leucine-rich repeat 326..347 CDD:275380 3/28 (11%)
leucine-rich repeat 348..394 CDD:275380 15/47 (32%)
LRR_8 369..428 CDD:290566 15/58 (26%)
LRR_4 393..433 CDD:289563 10/39 (26%)
leucine-rich repeat 395..418 CDD:275380 9/22 (41%)
NrrosNP_001334110.1 LRR 1. /evidence=ECO:0000255 58..79 12/45 (27%)
PLN00113 60..>439 CDD:215061 105/441 (24%)
leucine-rich repeat 60..82 CDD:275380 11/46 (24%)
LRR 2. /evidence=ECO:0000255 82..103 5/20 (25%)
leucine-rich repeat 83..106 CDD:275380 6/22 (27%)
LRR 3. /evidence=ECO:0000255 106..127 6/20 (30%)
leucine-rich repeat 107..133 CDD:275380 8/25 (32%)
LRR 4. /evidence=ECO:0000255 133..155 9/21 (43%)
leucine-rich repeat 134..158 CDD:275380 10/23 (43%)
LRR_8 157..217 CDD:404697 16/62 (26%)
LRR 5. /evidence=ECO:0000255 158..179 8/20 (40%)
leucine-rich repeat 159..182 CDD:275380 7/22 (32%)
LRR 6. /evidence=ECO:0000255 182..203 6/20 (30%)
leucine-rich repeat 183..206 CDD:275380 6/25 (24%)
LRR 7. /evidence=ECO:0000255 206..227 4/23 (17%)
leucine-rich repeat 207..251 CDD:275380 8/46 (17%)
LRR 8. /evidence=ECO:0000255 228..239 3/10 (30%)
leucine-rich repeat 230..249 CDD:275380 2/18 (11%)
LRR 9. /evidence=ECO:0000255 251..272 0/20 (0%)
leucine-rich repeat 252..273 CDD:275380 0/20 (0%)
LRR 10. /evidence=ECO:0000255 273..294 7/20 (35%)
leucine-rich repeat 274..329 CDD:275380 12/54 (22%)
PLN00113 309..>638 CDD:215061 42/181 (23%)
LRR 11. /evidence=ECO:0000255 329..350 9/21 (43%)
leucine-rich repeat 330..353 CDD:275380 10/23 (43%)
LRR 12. /evidence=ECO:0000255 353..374 4/20 (20%)
leucine-rich repeat 354..377 CDD:275380 4/22 (18%)
LRR 13. /evidence=ECO:0000255 377..398 8/22 (36%)
leucine-rich repeat 378..403 CDD:275380 12/40 (30%)
LRR 14. /evidence=ECO:0000255 403..424 4/28 (14%)
leucine-rich repeat 404..427 CDD:275380 3/30 (10%)
LRR 15. /evidence=ECO:0000255 427..448 4/27 (15%)
leucine-rich repeat 428..463 CDD:275380 8/37 (22%)
LRR 16. /evidence=ECO:0000255 463..484
leucine-rich repeat 464..486 CDD:275380
LRR 17. /evidence=ECO:0000255 486..507
leucine-rich repeat 487..512 CDD:275380
LRR 18. /evidence=ECO:0000255 512..533
leucine-rich repeat 513..537 CDD:275380
LRR 19. /evidence=ECO:0000255 537..558
leucine-rich repeat 538..559 CDD:275380
LRR 20. /evidence=ECO:0000255 559..580
LRR 21. /evidence=ECO:0000255 585..605
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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