Sequence 1: | NP_650951.1 | Gene: | cDIP / 42512 | FlyBaseID: | FBgn0038865 | Length: | 554 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510426.1 | Gene: | sym-1 / 181555 | WormBaseID: | WBGene00006366 | Length: | 680 | Species: | Caenorhabditis elegans |
Alignment Length: | 393 | Identity: | 98/393 - (24%) |
---|---|---|---|
Similarity: | 173/393 - (44%) | Gaps: | 47/393 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 EGKVTSCRGFEFAGEDEKATFDLPTEVRIAEDGTTYEVGDEEHSRTLIFENCTFTNFPLRLFYTL 116
Fly 117 EVSELDMRGCGIRFIYWENFSIGADKLVILLLSDNHIEVLPTKTFRGAGNLEFIFLNRNKLGKLQ 181
Fly 182 AGAFDNLLKLQYLDLTENRLEALAADVFAGLK-SLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQ 245
Fly 246 NNRLREVGEYAFRSRGRHHQMQYVDLSNNPELVVLLLNINATNLT-ARNCSLDRV----NLYGSV 305
Fly 306 TNVDLSDNRVRELYFPASEALEHLVLRNNSLVQLAS--LSRVPRLRHLDVADNPNLGQLPDGWRT 368
Fly 369 PHLEMLVLRNTGQMELPLEALQGMQNLQKLDISGNNLTEIDPSAFPTLTQLTHFYIHGNNWNCFS 433
Fly 434 LRN 436 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cDIP | NP_650951.1 | leucine-rich repeat | 118..142 | CDD:275380 | 4/23 (17%) |
LRR_RI | 143..407 | CDD:238064 | 64/271 (24%) | ||
leucine-rich repeat | 143..166 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 166..225 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 167..190 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 191..214 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 215..238 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 239..265 | CDD:275380 | 2/25 (8%) | ||
leucine-rich repeat | 266..325 | CDD:275380 | 13/63 (21%) | ||
LRR_8 | 304..357 | CDD:290566 | 11/54 (20%) | ||
leucine-rich repeat | 326..347 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 348..394 | CDD:275380 | 11/45 (24%) | ||
LRR_8 | 369..428 | CDD:290566 | 16/58 (28%) | ||
LRR_4 | 393..433 | CDD:289563 | 11/39 (28%) | ||
leucine-rich repeat | 395..418 | CDD:275380 | 7/22 (32%) | ||
sym-1 | NP_510426.1 | leucine-rich repeat | 62..81 | CDD:275380 | 5/24 (21%) |
LRR_5 | 74..208 | CDD:290045 | 36/133 (27%) | ||
LRR_RI | 81..384 | CDD:238064 | 77/324 (24%) | ||
leucine-rich repeat | 86..108 | CDD:275380 | 4/21 (19%) | ||
leucine-rich repeat | 110..133 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 134..157 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 158..182 | CDD:275380 | 9/23 (39%) | ||
LRR_8 | 182..241 | CDD:290566 | 13/74 (18%) | ||
leucine-rich repeat | 183..206 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 5/33 (15%) | ||
leucine-rich repeat | 231..254 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 253..313 | CDD:290566 | 14/63 (22%) | ||
leucine-rich repeat | 255..278 | CDD:275380 | 7/26 (27%) | ||
leucine-rich repeat | 279..302 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 302..384 | CDD:290566 | 22/83 (27%) | ||
leucine-rich repeat | 303..323 | CDD:275380 | 4/19 (21%) | ||
leucine-rich repeat | 350..373 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 374..394 | CDD:275380 | 7/18 (39%) | ||
leucine-rich repeat | 399..410 | CDD:275378 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45617 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |