DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and lron-15

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_495322.3 Gene:lron-15 / 174079 WormBaseID:WBGene00016974 Length:1275 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380
LRR_RI 143..407 CDD:238064
leucine-rich repeat 143..166 CDD:275380
LRR_8 166..225 CDD:290566
leucine-rich repeat 167..190 CDD:275380
leucine-rich repeat 191..214 CDD:275380
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..265 CDD:275380
leucine-rich repeat 266..325 CDD:275380
LRR_8 304..357 CDD:290566
leucine-rich repeat 326..347 CDD:275380
leucine-rich repeat 348..394 CDD:275380
LRR_8 369..428 CDD:290566
LRR_4 393..433 CDD:289563
leucine-rich repeat 395..418 CDD:275380
lron-15NP_495322.3 LRR_8 95..155 CDD:290566
leucine-rich repeat 120..144 CDD:275380
LRR_RI <144..348 CDD:238064
LRR_8 144..205 CDD:290566
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..194 CDD:275380
leucine-rich repeat 195..217 CDD:275380
LRR_8 217..274 CDD:290566
leucine-rich repeat 218..239 CDD:275380
leucine-rich repeat 240..263 CDD:275380
leucine-rich repeat 264..311 CDD:275380
LRR_8 289..346 CDD:290566
leucine-rich repeat 312..335 CDD:275380
leucine-rich repeat 336..356 CDD:275380
LRR_RI <338..498 CDD:238064
leucine-rich repeat 361..383 CDD:275380
leucine-rich repeat 384..405 CDD:275380
LRR_8 408..473 CDD:290566
leucine-rich repeat 409..432 CDD:275380
leucine-rich repeat 433..462 CDD:275380
LRR_8 461..522 CDD:290566
leucine-rich repeat 463..487 CDD:275380
leucine-rich repeat 488..511 CDD:275380
LRR_8 510..568 CDD:290566
LRR_4 510..551 CDD:289563
leucine-rich repeat 512..533 CDD:275380
LRR_4 533..573 CDD:289563
leucine-rich repeat 534..557 CDD:275380
leucine-rich repeat 558..581 CDD:275380
LRR_8 583..642 CDD:290566
leucine-rich repeat 584..607 CDD:275380
LRR_RI <607..799 CDD:238064
leucine-rich repeat 608..631 CDD:275380
LRR_8 630..688 CDD:290566
leucine-rich repeat 632..655 CDD:275380
leucine-rich repeat 656..676 CDD:275380
leucine-rich repeat 680..703 CDD:275380
leucine-rich repeat 704..749 CDD:275380
leucine-rich repeat 726..739 CDD:275378
LRR_8 748..808 CDD:290566
leucine-rich repeat 750..771 CDD:275380
leucine-rich repeat 774..797 CDD:275380
LRR_8 797..856 CDD:290566
LRR_RI <798..982 CDD:238064
leucine-rich repeat 798..845 CDD:275380
LRR_8 845..904 CDD:290566
leucine-rich repeat 846..869 CDD:275380
leucine-rich repeat 870..893 CDD:275380
leucine-rich repeat 894..915 CDD:275380
LRR_8 938..998 CDD:290566
leucine-rich repeat 940..963 CDD:275380
leucine-rich repeat 964..987 CDD:275380
leucine-rich repeat 988..1009 CDD:275380
leucine-rich repeat 1038..1064 CDD:275380
leucine-rich repeat 1113..1139 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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