DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and lron-11

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_491035.1 Gene:lron-11 / 171837 WormBaseID:WBGene00022129 Length:542 Species:Caenorhabditis elegans


Alignment Length:435 Identity:99/435 - (22%)
Similarity:176/435 - (40%) Gaps:115/435 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IVLVS---SLEGHCQTEGKVTS-CRGFEFAG-----EDEKATFDLPTE--VRIAEDGTTYEVGDE 92
            :||||   |.:..|:...|.|: |:|.....     :......||...  .|::.|    |:...
 Worm     9 LVLVSGVISCQSGCKCPTKTTAVCKGSSLRSIPILLDPRTTVLDLSNNRISRLSAD----ELSLY 69

  Fly    93 EHSRTLIFENCTFTNFPLRLFYTLEVSELDMRGCGIRFIYWENFSIGADKLVILLLSDNHIEVLP 157
            .:...||..|.:.|:....:|.||                        ..|.:|.||.|.:..||
 Worm    70 PNLEQLILHNNSITHLSADVFSTL------------------------PSLRVLDLSSNSLLSLP 110

  Fly   158 TKTFRGAGNLEFIFLNRNKLGKLQAGAFDNLLKLQYLDLTENRLEALAADVFAGLKSLRHVGLAG 222
            .:.|....||:.:.::.|.: :|....|..|.:||.|.:.:|||..|...|...|..||::.|:.
 Worm   111 NEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSA 174

  Fly   223 NQLTTIESDLFAHNPDLLSVAMQNNRLREVGEYAFRSRGRHHQMQYVDLSNNPELVVLLLNINAT 287
            |:|.::.:.:..:...|.::.::.|.|..:....|.|:   .:::::|:|.|      |:.    
 Worm   175 NKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQ---KELKHLDVSEN------LIG---- 226

  Fly   288 NLTARNCSLDRVNLYG--SVTNVDLSDNRVRELYFPAS----EALEHLVLRNNSLVQL--ASLSR 344
                   .::...|||  .:..::|::|::..|  |.:    .||:.|.|.:|..|.|  ||...
 Worm   227 -------DIEEGALYGLEKLETLNLTNNQLVRL--PGNTWSLPALKTLDLSSNLFVSLETASFDG 282

  Fly   345 VPRLRHLDVADNPNLGQLPDGWRTPHLEMLVLRNTGQMELPLEALQGMQNLQKLDISGNNLTEID 409
            :|.|::|:::.:.||                  .|.||...::    :.:|..|.||.:.||.|.
 Worm   283 LPALQYLNISHSRNL------------------KTIQMATFVQ----LSSLHWLSISSSALTHIH 325

  Fly   410 PSAFPTLTQLTH-----------------------FYIHGNNWNC 431
            ||||..:..|:|                       .::..|:|:|
 Worm   326 PSAFNPIPPLSHLDLSNNELRYVAPGMLQWPNIRNLHLANNDWHC 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 0/23 (0%)
LRR_RI 143..407 CDD:238064 66/271 (24%)
leucine-rich repeat 143..166 CDD:275380 8/22 (36%)
LRR_8 166..225 CDD:290566 19/58 (33%)
leucine-rich repeat 167..190 CDD:275380 5/22 (23%)
leucine-rich repeat 191..214 CDD:275380 9/22 (41%)
leucine-rich repeat 215..238 CDD:275380 5/22 (23%)
leucine-rich repeat 239..265 CDD:275380 5/25 (20%)
leucine-rich repeat 266..325 CDD:275380 11/64 (17%)
LRR_8 304..357 CDD:290566 16/58 (28%)
leucine-rich repeat 326..347 CDD:275380 8/22 (36%)
leucine-rich repeat 348..394 CDD:275380 7/45 (16%)
LRR_8 369..428 CDD:290566 16/81 (20%)
LRR_4 393..433 CDD:289563 16/62 (26%)
leucine-rich repeat 395..418 CDD:275380 11/22 (50%)
lron-11NP_491035.1 leucine-rich repeat 48..71 CDD:275380 5/26 (19%)
LRR_RI <50..177 CDD:238064 39/155 (25%)
LRR_8 70..130 CDD:290566 18/83 (22%)
leucine-rich repeat 72..95 CDD:275380 7/46 (15%)
leucine-rich repeat 96..119 CDD:275380 8/22 (36%)
LRR_8 118..177 CDD:290566 19/59 (32%)
leucine-rich repeat 120..142 CDD:275380 5/22 (23%)
LRR_RI <141..270 CDD:238064 34/150 (23%)
leucine-rich repeat 143..166 CDD:275380 9/22 (41%)
leucine-rich repeat 167..190 CDD:275380 5/22 (23%)
LRR_8 190..249 CDD:290566 14/78 (18%)
leucine-rich repeat 191..214 CDD:275380 5/25 (20%)
leucine-rich repeat 215..238 CDD:275380 7/39 (18%)
LRR_8 238..295 CDD:290566 16/58 (28%)
leucine-rich repeat 239..261 CDD:275380 4/23 (17%)
leucine-rich repeat 262..283 CDD:275380 8/20 (40%)
LRR_8 284..345 CDD:290566 21/82 (26%)
leucine-rich repeat 286..310 CDD:275380 7/45 (16%)
leucine-rich repeat 311..334 CDD:275380 11/22 (50%)
leucine-rich repeat 335..357 CDD:275380 2/21 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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