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Protein Alignment cDIP and iglr-3

DIOPT Version :9

Sequence 1:	NP_650951.1	Gene:	cDIP / 42512	FlyBaseID:	FBgn0038865	Length:	554	Species:	Drosophila melanogaster
Sequence 2:	NP_001293349.1	Gene:	iglr-3 / 171771	WormBaseID:	WBGene00021353	Length:	488	Species:	Caenorhabditis elegans

Alignment Length:	192	Identity:	45/192 - (23%)
Similarity:	78/192 - (40%)	Gaps:	41/192 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   237 PDLLSVAMQNNRLREVGEYAFRSRGRHHQMQYVDLSNNPELVVLLLNINATNLTARNCSL----- 296
            |::||:::.||.:..:  ..|.|..|..|...:|                      .|.|
Worm    49 PNVLSLSLSNNSIFRI--TTFPSEYRRLQSLRLD----------------------QCQLEKLDF 89

  Fly   297 DRVNLYGSVTNVDLSDNRVRELYFPASEA-LEHLVLRNNSLVQLASLSRVPRLRHLDVADNPNLG 360
            |.::::..:..:|:|.|.:.:|..|.:.| |..|.|..|:...:..:|.:..||.:|::.|..:.
Worm    90 DALSVFEQLRELDVSRNSLSKLIIPRNLASLRVLNLAFNAFTYVPDMSHLESLRLVDLSHNRLIS 154

  Fly   361 QLPDGWRTPHLEMLVLRNTGQMELPLEALQGMQNLQKLDISGNNLTEIDPSAFPTLTQLTHF 422
            ..|   |.....:.|:|........|.....:..||:||::.|:| |.|.|       |.||
Worm   155 VRP---RMLPFNLEVVRLAANRFQHLSPWPFLHKLQELDVTFNDL-ECDCS-------LWHF 205

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.