DRSC/TRiP Functional Genomics Resources

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Protein Alignment cDIP and AT1G33612

DIOPT Version :9

Sequence 1:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001185131.1 Gene:AT1G33612 / 10723140 AraportID:AT1G33612 Length:455 Species:Arabidopsis thaliana


Alignment Length:553 Identity:113/553 - (20%)
Similarity:173/553 - (31%) Gaps:197/553 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CSYLLISLAA-----------TATTDEDADADVDSGSSRI------VLVSSLEG---------HC 49
            ||:.|..|.|           .||.|.|.:|.:....|.|      :|.|..:|         .|
plant     4 CSFNLFILGAIIFLRCFRSTGAATCDPDDEAGLLGFKSGITKDPSGILSSWKKGTDCCFWSGVFC 68

  Fly    50 QTEGKVT--SCRG-FEFAGEDEKATFDLPTEVRIAEDGTTYEVGDEEH-SRTLIFENCTFTN-FP 109
            ....:||  |..| |...|.....|.. |...::            :| .|.|:......|. ||
plant    69 VNNDRVTQLSVDGDFSLDGNSPSGTIS-PMLAKL------------QHLERILLTSLRKITGPFP 120

  Fly   110 LRLFYTLEVSELDMRGCGIRFIYWENFSIGADKLVILLLSD----NHIEVLPTKTFRGAGNLEFI 170
            ..:|...:::.::::||                    |||.    |..|:...||....||:   
plant   121 QFIFRLPKLNYINIQGC--------------------LLSGPLPANIGELSQLKTLVIDGNM--- 162

  Fly   171 FLNRNKLGKLQAGAFDNLLKLQYLDLTENRLEALAADVFAGLKSLRHVGLAGNQLTTIESDLFAH 235
                 ..|.:.: :..||.:|.:|:|..|||.....::|..:|.|..:.|:.|       ..|..
plant   163 -----FTGHIPS-SIANLTRLTWLNLGNNRLSGTIPNIFKSMKELNSLDLSRN-------GFFGR 214

  Fly   236 -NPDLLSVAMQNNRLREVGEYAFRSRGRHHQMQYVDLSNNPELVVLLLNINATNLTARNCSLDRV 299
             .|.:.|:|                    ..:.|:|||.|                         
plant   215 LPPSIASLA--------------------PTLYYLDLSQN------------------------- 234

  Fly   300 NLYGSVTNVDLSDNRVRELYFPASEALEHLVLRNN--SLVQLASLSRVPRLRHLDVADNPNLGQL 362
            ||.|::.|           |....|||..|||..|  |.|...|.:.:..:.:||::.|...|..
plant   235 NLSGTIPN-----------YLSRFEALSTLVLSKNKYSGVVPMSFTNLINITNLDLSHNLLTGPF 288

  Fly   363 P-----DG------------------W--RTPHLEMLVLRNTGQMELPLE--ALQGMQNLQKLDI 400
            |     :|                  |  .:|.:..|.|...| :::.|:  .|.|......:|:
plant   289 PVLKSINGIESLDLSYNKFHLKTIPKWMISSPSIYSLKLAKCG-LKISLDDWKLAGTYYYDSIDL 352

  Fly   401 SGNNLTEIDPSAFPTLTQLTHFYIHGNNWNCFSL---------------RNIMDVLIRANGIAYT 450
            |.|.::.........:..|..|...||... |.|               ||::...:.|......
plant   353 SENEISGSPAKFLSQMKYLMEFRAAGNKLR-FDLGKLTFVRTLETLDLSRNLIFGRVLATFAGLK 416

  Fly   451 VDNYDPD----------FPGEYFHGIACMYRLP 473
            ..|...:          ||...|.|..|:...|
plant   417 TMNVSQNHLCGKLPVTKFPASXFAGNDCLCGSP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cDIPNP_650951.1 leucine-rich repeat 118..142 CDD:275380 2/23 (9%)
LRR_RI 143..407 CDD:238064 64/297 (22%)
leucine-rich repeat 143..166 CDD:275380 7/26 (27%)
LRR_8 166..225 CDD:290566 15/58 (26%)
leucine-rich repeat 167..190 CDD:275380 3/22 (14%)
leucine-rich repeat 191..214 CDD:275380 7/22 (32%)
leucine-rich repeat 215..238 CDD:275380 4/23 (17%)
leucine-rich repeat 239..265 CDD:275380 2/25 (8%)
leucine-rich repeat 266..325 CDD:275380 10/58 (17%)
LRR_8 304..357 CDD:290566 14/54 (26%)
leucine-rich repeat 326..347 CDD:275380 8/22 (36%)
leucine-rich repeat 348..394 CDD:275380 14/72 (19%)
LRR_8 369..428 CDD:290566 13/60 (22%)
LRR_4 393..433 CDD:289563 7/39 (18%)
leucine-rich repeat 395..418 CDD:275380 3/22 (14%)
AT1G33612NP_001185131.1 LRRNT_2 29..68 CDD:285463 8/38 (21%)
leucine-rich repeat 84..103 CDD:275380 3/31 (10%)
LRR_RI 121..404 CDD:238064 75/376 (20%)
LRR_8 151..211 CDD:290566 18/75 (24%)
leucine-rich repeat 153..176 CDD:275380 7/31 (23%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
leucine-rich repeat 201..225 CDD:275380 7/50 (14%)
LRR_8 224..284 CDD:290566 23/95 (24%)
leucine-rich repeat 226..249 CDD:275380 10/58 (17%)
leucine-rich repeat 250..273 CDD:275380 8/22 (36%)
leucine-rich repeat 274..296 CDD:275380 5/21 (24%)
leucine-rich repeat 297..324 CDD:275380 2/26 (8%)
leucine-rich repeat 325..370 CDD:275380 9/45 (20%)
leucine-rich repeat 394..414 CDD:275380 3/19 (16%)
leucine-rich repeat 415..441 CDD:275380 4/25 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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