DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp8 and USP3

DIOPT Version :10

Sequence 1:NP_650948.2 Gene:Usp8 / 42509 FlyBaseID:FBgn0038862 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_006528.2 Gene:USP3 / 9960 HGNCID:12626 Length:520 Species:Homo sapiens


Alignment Length:429 Identity:140/429 - (32%)
Similarity:203/429 - (47%) Gaps:58/429 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 DVHVVSDSLESLLQLTGDPDPTIAPNKAEIPTFDRAMKPQPRNVERTSQRVRDFSPVIGQNVGRG 561
            |..||:|:...|:|...:....: .|.|.  |.||..|   |.:...|........|.|......
Human    99 DDFVVNDTKLGLVQKVREHLQNL-ENSAF--TADRHKK---RKLLENSTLNSKLLKVNGSTTAIC 157

  Fly   562 LTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDK--------------YKNYISRSNKTNG-QVI 611
            .|||:||||||:||:|||.|||   :.::|...|              .:.|.:||...|. .::
Human   158 ATGLRNLGNTCFMNAILQSLSN---IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219

  Fly   612 EEVAALIKELWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQ------- 669
            ||....:..||.|.....:...|.|||.:....|||..|||:|||:..|:|.||.:||       
Human   220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVS 284

  Fly   670 TLHVPRQREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELP- 733
            ...:.::...:|||.|..:   ....:::..:|.|.:::.|.|:.|..||..::.|.:|||::| 
Human   285 RSAILQENSTLSASNKCCI---NGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS 346

  Fly   734 ----------PNSNVCQLNQCMDMYFSGERIHG---WNCPSCKTKRDAIKKLDISKLPPVLVVHL 785
                      .|..||.|..|:..:...|.:..   :.|..||.|:.:.||..|.|||.||.:||
Human   347 QFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHL 411

  Fly   786 KRFYADPSNSGSYM--KKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYGTMEG-GH 847
            |||:..     :|:  |...|:.|||..|||..|:...|:.......|.|.||..|:|:..| ||
Human   412 KRFHWT-----AYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGH 471

  Fly   848 YTAFCKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 886
            |||:  :.:.|:||.|:|..|:..|...||.:.||||||
Human   472 YTAY--ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp8NP_650948.2 USP8_dimer 2..114 CDD:462647
RHOD 148..278 CDD:444705
Smc <361..>511 CDD:440809 5/13 (38%)
Peptidase_C19R 564..887 CDD:239139 123/362 (34%)
USP3NP_006528.2 zf-UBP 29..105 CDD:460464 3/5 (60%)
UCH 159..508 CDD:425685 122/361 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.