Sequence 1: | NP_650948.2 | Gene: | Usp8 / 42509 | FlyBaseID: | FBgn0038862 | Length: | 896 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002662556.2 | Gene: | usp4 / 449927 | ZFINID: | ZDB-GENE-041008-187 | Length: | 1009 | Species: | Danio rerio |
Alignment Length: | 1063 | Identity: | 212/1063 - (19%) |
---|---|---|---|
Similarity: | 319/1063 - (30%) | Gaps: | 511/1063 - (48%) |
- Green bases have known domain annotations that are detailed below.
Fly 229 TKDAQPATNT---AISTLLDIL---------------KNWDPDVTYRAPIQIVEGGYEYFIM--- 272
Fly 273 ----MYPTHCTNPSVQAPQQNNNDIE-TIDDIEYPSIHDITMKEDISAKDFRPRPDFNRA----- 327
Fly 328 ----NKPAATRVNEQGISRPSPPAKPIAEIMRDQAEFLQRAEQNDEQLEKASKMWKRQAAEGDGL 388
Fly 389 NATEDQELHFRILQLESKAQDYIVENNRLREELSRIQ-ELHNVTQQLSQKEVEATRNIESKIRER 452
Fly 453 -QRLDEQHELERQERERLLAIARETKK--------HYKSPTPSG-----PPSPGRNLEDVHVVSD 503
Fly 504 SLESLLQLTGDPDPTIAPNKAEIPTFDRAMKPQPRNVERTSQRVRDFSPVIGQNVGR------GL 562
Fly 563 TGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNK--TNGQVIEEVAALIKELWNGQ 625
Fly 626 YKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVP----------RQREMI 680
Fly 681 SASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELP------------ 733
Fly 734 ----------------------------------PNSNVC-----------------QLNQCMD- 746
Fly 747 -------------------MYF-----------SG---------------------------ERI 754
Fly 755 -------------------------------------HG-------------------------- 756
Fly 757 ----------------------------------------------------------------- 756
Fly 757 ----------------------------------------------------------------- 756
Fly 757 ------------------WNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYM---- 799
Fly 800 -KKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKF 863
Fly 864 DDQVVSALDSSNVVSSAAYILFY 886 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Usp8 | NP_650948.2 | USP8_dimer | 2..113 | CDD:286108 | |
RHOD | 148..278 | CDD:294087 | 14/73 (19%) | ||
UCH | 562..886 | CDD:278850 | 148/672 (22%) | ||
Peptidase_C19R | 564..887 | CDD:239139 | 149/672 (22%) | ||
usp4 | XP_002662556.2 | UBP12 | 8..981 | CDD:227847 | 212/1063 (20%) |
DUSP | 44..141 | CDD:197831 | 17/122 (14%) | ||
Ubiquitin_3 | 155..242 | CDD:291502 | 18/112 (16%) | ||
Peptidase_C19 | 319..>507 | CDD:271592 | 74/189 (39%) | ||
USP7_C2 | 526..>606 | CDD:291217 | 8/79 (10%) | ||
Peptidase_C19R | <834..979 | CDD:239139 | 60/156 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 277 | 1.000 | Domainoid score | I1692 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1591 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |