DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp8 and USP27X

DIOPT Version :10

Sequence 1:NP_650948.2 Gene:Usp8 / 42509 FlyBaseID:FBgn0038862 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_001138545.1 Gene:USP27X / 389856 HGNCID:13486 Length:438 Species:Homo sapiens


Alignment Length:405 Identity:122/405 - (30%)
Similarity:193/405 - (47%) Gaps:75/405 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 EIPTFDRAMKPQPRNVERTSQRVRDFSPVIGQNVGRGLTGLKNLGNTCYMNSILQCLSNTPQLTE 589
            :.||:: ..||:...:....:|.|     |..:...||.||.||||||:||.|:|.|::||.|.:
Human    46 KFPTWE-TTKPELELLGHNPRRRR-----ITSSFTIGLRGLINLGNTCFMNCIVQALTHTPILRD 104

  Fly   590 YCISDKYKNYISRSNKTNGQVIEEVAALIKELWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSH 654
            :.:||:::..:......   ::.|:::|.:||::|.........|.::|..:.:...|..|||:|
Human   105 FFLSDRHRCEMPSPELC---LVCEMSSLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAH 166

  Fly   655 EFLTILMDWLHSDLQTLHVPRQREMISASEKAWLEFTKAKES------MILHLFYGQMKSTVKCV 713
            |||...:|.||...:...|                 .||..:      :|..:|.|.::|.|.|.
Human   167 EFLIAALDVLHRHCKGDDV-----------------GKAANNPNHCNCIIDQIFTGGLQSDVTCQ 214

  Fly   714 ACHKESATYESFSNLSLELP-------PNS--------------NVCQLNQCMDMYFSGERIHG- 756
            |||..|.|.:...::||:||       |.|              .:..|..|:..:...|.:.. 
Human   215 ACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSS 279

  Fly   757 --WNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKK-QNYLRFPLENLDMNPYI 818
              ..|.||::.:::.|:|.::|||.|...|.|||    .:|....:| ..|:.|||| |||.|::
Human   280 AKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRF----EHSAKQRRKITTYISFPLE-LDMTPFM 339

  Fly   819 ARA-ESR-----------AVTPKTYQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSAL 871
            |.: |||           ......|.|:||.||.||:|.||||:|.:. :..:|||.||.|::..
Human   340 ASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLESGHYTSFIRH-HKDQWFKCDDAVITKA 403

  Fly   872 DSSNVVSSAAYILFY 886
            ...:|:.|..|:|||
Human   404 SIKDVLDSEGYLLFY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp8NP_650948.2 USP8_dimer 2..114 CDD:462647
RHOD 148..278 CDD:444705
Smc <361..>511 CDD:440809
Peptidase_C19R 564..887 CDD:239139 113/366 (31%)
USP27XNP_001138545.1 Peptidase_C19D 78..419 CDD:239125 113/367 (31%)
Blue background indicates that the domain is not in the aligned region.

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