Protein Alignment Usp8 and Usp39

DIOPT Version :9

• Sequence 1: NP_650948.2
• Gene: Usp8 / 42509
• FlyBaseID: FBgn0038862
• Length: 896
• Species: Drosophila melanogaster
• Sequence 2: NP_573334.1
• Gene: Usp39 / 32881
• FlyBaseID: FBgn0030969
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 427
• Identity: 99/427 - (23%)
• Similarity: 182/427 - (42%)
• Gaps: 77/427 - (18%)

  Fly   496 EDVHVVSDSLESLLQLTGDPDPTIAPNKAEIPTFDRAMKPQPRNVERTSQRVRDFSPVIGQNVGR 560
            ::..::..||:.:..:.   :||.  .:.||...|:.   ||:: .||...|. :.|
  Fly   110 DNYEIIDSSLDDIKYVL---NPTF--TRQEISKLDQL---QPKH-SRTVDGVL-YLP-------- 156

  Fly   561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCI-SDKYKNYISRSNKTNGQVIEEVAALIKELWNG 624
            |:.||.|:....|.|.:|..||:...|.:|.: ...|.:.:.....:...:::....|::::||.
  Fly   157 GVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELMRKMWNP 221

  Fly   625 Q-YKCVAS--RDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMISASEKA 686
            : :|...|  ..|:.||....|.|:..:|.|..:||:    |.   |.|||            :|
  Fly   222 RNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLS----WF---LNTLH------------RA 267

  Fly   687 WLEFTKAKESMILH-LFYGQMK--------------STVKCVAC--HKESATYESFSNLSLELPP 734
             |:..|...|.||: :|.|:||              :..:.:|.  :|:....::|..|:.:|||
  Fly   268 -LKGNKHPNSSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYKDQVEDKNFIYLTCDLPP 331

  Fly   735 --------NSNVC-QLNQCMDMYFSGERIHGWNCPSCKT-KRDAIKKLDISKLPPVLVVHLKRFY 789
                    ..|:. |:|    :|....:.:|......|| |.:.:|:.:|::||..:::::|||
  Fly   332 PPLFTDEFRENIIPQVN----LYQLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFIILYIKRF- 391

  Fly   790 ADPSNSGSYMKKQNYLRFPLENLDMNPYIA-RAESRAVTPKTYQLYAVSNHYGTMEGGHYTAFCK 853
              ..|:....|....:.||::::|....:. |...:.|....|.|.|...|.|..:.|.|.|...
  Fly   392 --TKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRDKDVKDTKYNLVANIVHDGDPKKGTYRAHIL 454

  Fly   854 SANYGKWFKFDDQVVSALDSSNVVSSAAYILFYTWLP 890
            ....|:|::..|..|:.:....:..:.:||..|...|
  Fly   455 HKANGQWYEMQDLHVTEILPQMITLTESYIQIYERCP 491

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp8	NP_650948.2	USP8_dimer	2..113	CDD:286108
		RHOD	148..278	CDD:294087
		UCH	562..886	CDD:278850	83/355 (23%)
		Peptidase_C19R	564..887	CDD:239139	83/354 (23%)
Usp39	NP_573334.1	Peptidase_C19M	39..488	CDD:239134	97/422 (23%)
		UCH	158..487	CDD:278850	83/355 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR21646
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010