DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp8 and USP22

DIOPT Version :9

Sequence 1:NP_650948.2 Gene:Usp8 / 42509 FlyBaseID:FBgn0038862 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_056091.1 Gene:USP22 / 23326 HGNCID:12621 Length:525 Species:Homo sapiens


Alignment Length:416 Identity:125/416 - (30%)
Similarity:195/416 - (46%) Gaps:74/416 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 LQLTGDPDPTIAPNKAEIPTFDRAMKPQPRNVERTSQRVRDFSPVIGQNVGRGLTGLKNLGNTCY 573
            :|..|:...|..|.|.|:    ..:|..|:..:.||            |...||.||.||||||:
Human   138 MQGVGEKFSTWEPTKREL----ELLKHNPKRRKITS------------NCTIGLRGLINLGNTCF 186

  Fly   574 MNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKELWNGQYKCVASRDLRYVV 638
            ||.|:|.|::||.|.::.:||:::   ......:..::.|:::|.:|.::|.........|.::|
Human   187 MNCIVQALTHTPLLRDFFLSDRHR---CEMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLV 248

  Fly   639 GQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMISASEKAWLEFTKAKESMILHLFY 703
            ..:.:...|.:|||:||||...:|.||         |..:.....:||  ........:|..:|.
Human   249 WTHARHLAGYEQQDAHEFLIAALDVLH---------RHCKGDDNGKKA--NNPNHCNCIIDQIFT 302

  Fly   704 GQMKSTVKCVACHKESATYESFSNLSLELPPNS------------NVCQ----------LNQCMD 746
            |.::|.|.|..||..|.|.:.|.::||:||.:|            ||..          |..|:.
Human   303 GGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTDCLR 367

  Fly   747 MYFSGERIHG---WNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKK-QNYLRF 807
            .:...|.:..   ..|..|.:.:::.|:|.:.|||.|...|||||    .:|....:| ..|:.|
Human   368 RFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRF----EHSAKLRRKITTYVSF 428

  Fly   808 PLENLDMNPYIARA-ESR-----------AVTPKTYQLYAVSNHYGTMEGGHYTAFCKSANYGKW 860
            ||| |||.|::|.: |||           ......|.|:||.||.||:|.||||:|.:. :..:|
Human   429 PLE-LDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQ-HKDQW 491

  Fly   861 FKFDDQVVSALDSSNVVSSAAYILFY 886
            ||.||.:::.....:|:.|..|:|||
Human   492 FKCDDAIITKASIKDVLDSEGYLLFY 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp8NP_650948.2 USP8_dimer 2..113 CDD:286108
RHOD 148..278 CDD:294087
UCH 562..886 CDD:278850 111/361 (31%)
Peptidase_C19R 564..887 CDD:239139 112/361 (31%)
USP22NP_056091.1 zf-UBP 63..123 CDD:396634
Peptidase_C19D 176..518 CDD:239125 112/362 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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