DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp8 and Usp15

DIOPT Version :10

Sequence 1:NP_650948.2 Gene:Usp8 / 42509 FlyBaseID:FBgn0038862 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_081880.2 Gene:Usp15 / 14479 MGIID:101857 Length:981 Species:Mus musculus


Alignment Length:840 Identity:177/840 - (21%)
Similarity:267/840 - (31%) Gaps:396/840 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 KAQDYIVE---------NNRLREELSRIQELHNVTQQLSQKEVEATRNI----ESKIRERQRLDE 457
            |.:.|:.|         ||.:....|:...:..:     :||:....||    |:::..:...:.
Mouse   128 KVEVYLTELKLCENGNMNNVVTRRFSKADTIDTI-----EKEIRKIFNIPDEKEARLWNKYMSNT 187

  Fly   458 QHELERQE---------RERLLAIARETKKHYKSPTPSGPPSPGRNLEDVHVVSDSLESLLQLTG 513
            ...|.:.:         :.::|.|.::.:.......||.|.|||         :.:..:|     
Mouse   188 FEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGPSTPKSPG---------ASNFSTL----- 238

  Fly   514 DPDPTIAPNKAEIPTFDRAMKPQPRNVER--------TSQRVRDFSPVIGQNVGRGLTGLKNLGN 570
               |.|:|:...    :.......|||:.        |:.:..|:|.....|...||.||.||||
Mouse   239 ---PKISPSSLS----NNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGN 296

  Fly   571 TCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNK--TNGQVIEEVAALIKELWNGQYKCVASRD 633
            ||:|||.:|||||||.||||.::|||:..::..|.  ..|::.:..|.|||::|:|::..|..|.
Mouse   297 TCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRA 361

  Fly   634 LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMIS-----------ASEKAW 687
            .:..||::...|.|..|||..|.|..|:|.||.||..:   |::..|.           .:|:||
Mouse   362 FKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRI---RKKPYIQLKDADGRPDKVVAEEAW 423

  Fly   688 LEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELP------------------- 733
            ....|..:|:|:.:|:|..|||:.|..|.|.|.|::.|..|:|.||                   
Mouse   424 ENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAK 488

  Fly   734 ----------------------------------------------------------------- 733
                                                                             
Mouse   489 PMQYKVIVPKIGNILDLCTALSALSGVPADKMIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFE 553

  Fly   734 ----------------------------------------------------------------- 733
                                                                             
Mouse   554 ININRAEDTEHVVIPVCLREKFRHSSYTHHTGSSLFGQPFLMAIPRNNTEDKLYNLLLLRMCRYV 618

  Fly   734 -------------------------PN-------------------------------------- 735
                                     ||                                      
Mouse   619 KMSTETEETDGHLRCCEDQNINGNGPNGLHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDS 683

  Fly   736 --------SNVC----------------------------------------------------- 739
                    :.:|                                                     
Mouse   684 VGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGNNDINYIKDDTSHIRFDDRQLRLDERSF 748

  Fly   740 --------------------------------------QLNQCMDMYFSGERIHG---WNCPSCK 763
                                                  :|..|::::.:.|::..   |.||:||
Mouse   749 LALDWDPDLKKRYFDENAAEDFEKHESVEYKPPKRPFVKLKDCIELFTTKEKLGAEDPWYCPNCK 813

  Fly   764 TKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYM--KKQNYLRFPLENLDMNPYIARAESRAV 826
            ..:.|.||||:..||||||||||||     :...||  |....:.||:.:|||:.::....:   
Mouse   814 EHQQATKKLDLWSLPPVLVVHLKRF-----SYSRYMRDKLDTLVDFPISDLDMSEFLINPNA--- 870

  Fly   827 TPKTYQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 886
            .|..|.|.|||||||.|.|||||||.|:.:.|||:.|||..||......:||.|||:|||
Mouse   871 GPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFY 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp8NP_650948.2 USP8_dimer 2..114 CDD:462647
RHOD 148..278 CDD:444705
Smc <361..>511 CDD:440809 21/126 (17%)
Peptidase_C19R 564..887 CDD:239139 144/652 (22%)
Usp15NP_081880.2 Mediates interaction with SART3. /evidence=ECO:0000250|UniProtKB:Q9Y4E8 2..223 14/99 (14%)
UBP12 12..932 CDD:227847 177/840 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..237 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 633..694 2/60 (3%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 952..981
Blue background indicates that the domain is not in the aligned region.

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