DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trm7-34 and AT5G13830

DIOPT Version :10

Sequence 1:NP_650947.1 Gene:Trm7-34 / 42508 FlyBaseID:FBgn0038861 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_196887.1 Gene:AT5G13830 / 831229 AraportID:AT5G13830 Length:224 Species:Arabidopsis thaliana


Alignment Length:233 Identity:59/233 - (25%)
Similarity:99/233 - (42%) Gaps:54/233 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYEPL------- 67
            |.|||.|:..|:.|||||||||..:.::|::..:..:||..|||:|.||..:.| .||       
plant     8 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSL-GPLRSGGIVV 71

  Fly    68 ---------PPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDG 123
                     ||:...:|:.||.|:... |.:.:::|    |.:....::|           :||.
plant    72 GMDIKKVKVPPQCDSRVQTIAADVLNF-PRQKIREL----SPQQLGFSVI-----------LSDM 120

  Fly   124 APDSTGMHDFDSYVQGELLLSALSIST---------------------FILEEGGSFVSKIYRAD 167
            ....:|:...|:.:..||.:.||.::.                     .:|..||..|.|:..::
plant   121 CHSVSGITTRDAALSAELGMRALDLAVGQAAISQSPNDDDGGPNESRPGVLRHGGHLVIKLLESE 185

  Fly   168 RTSRLYTQLKRFFKNVCVFKPSASRNSSIEAFVVAREF 205
            .........|..|......:|.|:|.||.|.:::.:.|
plant   186 DAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGF 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-34NP_650947.1 RlmE 1..205 CDD:440062 58/231 (25%)
AT5G13830NP_196887.1 RlmE 8..224 CDD:440062 59/233 (25%)

Return to query results.
Submit another query.